DOI QR코드

DOI QR Code

L-glutamine:D-fructose-6-phosphate Aminotransferase as a Key Protein Linked to Multidrug Resistance in E. coli KD43162

  • Lee, Sung-Eun (School of Applied Biosciences, Kyungpook National University) ;
  • Jung, Tae-Jeon (Department of Laboratory Medicine, Kosin University Gospel Hospital College of Medicine) ;
  • Park, Byeoung-Soo (Research Station, Nanotoxtech Inc.) ;
  • Kim, Byung-Woo (Department of Life Science and Biotechnology, Dongeui University) ;
  • Lee, Eun-Woo (Department of Life Science and Biotechnology, Dongeui University) ;
  • Kim, Hye Jin (Department of Dental Hygiene, Dongeui University) ;
  • Yum, Jong Hwa (Department of Clinical Laboratory Science, Dongeui University)
  • Received : 2015.05.21
  • Accepted : 2015.05.27
  • Published : 2015.09.30

Abstract

A microarray study has been employed to understand changes of gene expression in E. coli KD43162 resistant to ampicillin, ampicillin-sulbactam, piperacillin, piperacillin-tazobactam, cefazolin, cefepime, aztreonam, imipenem, meropenem, gentamicin, tobramycin, ciprofloxacin, levofloxacin, moxifloxacin, fosfomycin, and trimethoprim-sulfamethoxazole except for amikacin using disk diffusion assay. Using Sodium dodecyl sulphate-polyacrylamide gel electrophoresis and MALDI-TOF MS analyses, 36 kDa of outer membrane proteins (OMPs) was found to be deleted in the multidrug resistant E. coli KD 43162. Microarray analysis was used to determine up- and down-regulated genes in relation to multidrug resistant E. coli KD43162. Among the up-regulated genes, these genes were corresponded to express the proteins as penicillin-binding proteins (PBPs), tartronate semialdehyde reductase, ethanolamine utilization protein, shikimate kinase I, allantoinase, predicted SAM-dependent methyltransferase, L-glutamine: D-fructose-6-phosphate aminotransferase (GFAT), phospho-glucosamine mutase, predicted N-acetylmannosamine kinase, and predicted N-acetylmannosamine-6-P epimerase. Up-regulation of PBPs, one of primary target sites of antibiotics, might be responsible for the multidrug resistance in E. coli with increasing amount of target sites. Up-regulation of GFAT enzyme may be related to the up-regulation of PBPs because GFAT produces N-acetylglucosamine, a precursor of peptidoglycans. One of GFAT inhibitors, azaserine, showed a potent inhibition on the growth of E. coli KD43162. In conclusion, up-regulation of PBPs and GFATs with the loss of 36 kDa OMP refers the multidrug resistance in E. coli KD 43162.

Keywords

References

  1. Barreteau H, Kovac A, Boniface A, Sova M, Gobec S, and Blanot D (2008) Cytoplasmic steps of peptidoglycan biosynthesis. FEMS Microbiol Rev 32, 161-207.
  2. Chopra S, Ramkissoon K, and Anderson DC (2013) A systematic quantitative proteomic examination of multidrug resistance in Acinetobacter baumannii. J Proteomics 84, 17-39. https://doi.org/10.1016/j.jprot.2013.03.008
  3. Cierniak P, Jubner M, Muller S, and Bender K (2013) Insights into mechanisms and proteomic characterization of Pseudomonas aeruginosa adaptation to a novel antimicrobial substance. PLoS One 8, e66862. https://doi.org/10.1371/journal.pone.0066862
  4. Clarke B, Hiltz M, Musgrave H, and Forward KR (2003) Cephamycin resistance in clinical isolates and laboratory-derived strains of Escherichia coli, Nova Scotia, Canada. Emerg Infect Dis 9, 1254-9. https://doi.org/10.3201/eid0910.030093
  5. CLSI (2010) Performance standards for antimicrobial susceptibility testing:Twenty-first informational supplement. Clinical and Laboratory Standards Institute, USA.
  6. Dehennaut V, Lefebvre T, Sellier C, Leroy Y, Gross B, Walker S et al. (2007) O-liked N-acetylglucosaminetransferase inhibition prevents $G_2$/M transition in Xenopus laevis oocytes. J Biol Chem 282, 12527-36. https://doi.org/10.1074/jbc.M700444200
  7. Derouaux A, Turk S, Olrichs NK, Gobec S, Breukink E, Amoroso A et al. (2011) Small molecule inhibitors of peptidoglycan synthesis targeting the lipid II precursor. Biochem Pharmacol 81, 1098-105. https://doi.org/10.1016/j.bcp.2011.02.008
  8. Farrugia DN, Elbourne LD, Hassan KA, Eijkelkamp BA, Tetu SG, Brown MH et al. (2013) The complete genome and phenome of a communityacquired Acinetobacter baumannii. PLoS One 8, e58628. https://doi.org/10.1371/journal.pone.0058628
  9. Kurosu M, Siricilla S, and Mitachi K (2013) Advances in MRSA drug discovery: where are we and where do we need to be? Expert Opin Drug Discov 8, 1095-116. https://doi.org/10.1517/17460441.2013.807246
  10. Latigue MF, Poirel L, Poyart C, Reglier-Poupet H, and Nordmann P (2007) Ertapenem resistance of Escherichia coli. Emerg Infect Dis 13, 315-7. https://doi.org/10.3201/eid1302.060747
  11. Lavigne JP, Sotto A, Nicolas-Chanoine MH, Bouziges N, Pages JM, and Davin-Regli A (2013) An adaptive response of Enterobacter aerogenes to imipenem: regulation of porin balance in clinical isolates. Int J Antimicrob Agents 41, 130-6. https://doi.org/10.1016/j.ijantimicag.2012.10.010
  12. Lee K, Chong Y, Shin HB, Kim YA, Yong D, and Yum JH (2001) Modified Hodge test and EDTA-disk synergy tests to screen metallo-betalactamase-producing strains of Pseudomonas and Acinetobacter species. Clin Microbiol Infect 7, 88-91. https://doi.org/10.1046/j.1469-0691.2001.00204.x
  13. Lee K, Kim CK, Yong D, Jeong SH, Yum JH, Seo YH et al. (2010) Improved performance of the modified Hodge test with MacConkey agar for screening carbapenemase-producing Gram-negative bacilli. J Microbiol Methods 83, 149-52. https://doi.org/10.1016/j.mimet.2010.08.010
  14. Lee K, Lim YS, Yong D, Yum JH, and Chong Y (2003) Evaluation of the Hodge Test and the Imipenem-EDTA Double-Disk Synergy Test for Differentiating Metallo-beta-Lactamase-Producing Isolates of Pseudomonas spp. and Acinetobacter spp. J Clin Microbiol 41, 4623-9. https://doi.org/10.1128/JCM.41.10.4623-4629.2003
  15. Lee K, Yong D, Choi YS, Yum JH, Kim JM, Woodford N et al. (2007) Reduced imipenem susceptibility in Klebsiella pneumonia clinical isolates with plasmid-mediated CMY-2 and DHA-1 ${\beta}$-lactamases comediated by porin loss. Int J Antimicrob Agents 29, 201-6. https://doi.org/10.1016/j.ijantimicag.2006.09.006
  16. Lee K, Yum JH, Yong D, Lee HM, Kim HD, Docquier JD et al. (2005) Novel acquired metallo-${\beta}$-lactamase gene, blaSIM-1, in a class 1 integron from Acinetobacter baumannii clinical isolates from Korea. Antimicrob Agents Chemother 49, 4485-91. https://doi.org/10.1128/AAC.49.11.4485-4491.2005
  17. Lim SK, Park IW, Lee WG, Kim HK, and Choi YH (2012) Change of antimicrobial susceptibility among Escherichia coli strains isolated from female patients with community-onset acute pyelonephritis. Yonsei Med J 53, 164-71. https://doi.org/10.3349/ymj.2012.53.1.164
  18. Liu YF, Yan JJ, Ko WC, Tsai SH, and Wu JJ (2008) Characterization of carbapenem-non-susceptible Escherichia coli isolates from a university hospital in Taiwan. J Antimicrob Chemother 61, 1020-3. https://doi.org/10.1093/jac/dkn049
  19. McEwen SA and Fedorka-Cray PJ (2002) Antimicrobial use and resistance in animals. Clin Infect Dis 34(S3), S93-S106. https://doi.org/10.1086/340246
  20. Moya B, Dotsch A, Juan C, Blazquez J, Zamorano L, Hausslr S et al. (2009) ${\beta}$-lactam resistance response triggered by inactivation of nonessential penicillin-binding protein. PLoS Pathogen 5, e1000353. https://doi.org/10.1371/journal.ppat.1000353
  21. Oteo J, Delgado-Iribarren A, Vega D, Bautista V, Rodriguez MC, Velasco M et al. (2008) Emergence of imipenem resistance in clinical Escherichia coli during therapy. Int J Antimicrob Agents 32, 534-7. https://doi.org/10.1016/j.ijantimicag.2008.06.012
  22. Park BS, Lee BH, Kim TW, Ren Y, and Lee SE (2008) Proteomic evaluation of adults of Rhyzopertha dominica resistant to phosphine. Envrion Toxicol Pharmacol 25, 121-6. https://doi.org/10.1016/j.etap.2007.10.028
  23. Park MJ, Kim TK, Song W, Kim JS, Kim HS, and Lee J (2013) An increase in the clinical isolation of acquired AmpC ${\beta}$-lactamase-producing Klebsiella pneumonia in Korea from 2007 to 2010. Ann Lab Med 33, 353-5. https://doi.org/10.3343/alm.2013.33.5.353
  24. Patzer JA, Walsh TR, Weeks J, Dzierzanowska D, and Toleman MA (2009) Emergence and persistence of integron structures harbouring VIM genes in the Children's Memorial Health Institute, Warsaw, Poland, 1998-2006. J Antimicrob Chemother 63, 269-73.
  25. Ramos-Aires J, Plesiat P, Kocjancic-Curty L, and Kohler T (2004) Selection of an antibiotic-hypersusceptible mutant of Pseudomonas aeruginosa: identification of the GlmR transcriptional regulator. Antimicrob Agents Chemther 48, 843-51. https://doi.org/10.1128/AAC.48.3.843-851.2004
  26. Richmond GE, Chua KL, and Piddock LJ (2013) Efflux in Acinetobacter baumannii can be determined by measuring accumulation of H33342 (bis-benzamide). J Antimicrob Chemother 68, 1594-600. https://doi.org/10.1093/jac/dkt052
  27. Sommer R, Joachim I, Wagner S, and Titz A (2013) New approaches to control infections: anti-biofilm strategies against gram-negative bacteria. Chimia 67, 286-90. https://doi.org/10.2533/chimia.2013.286
  28. Tegos GP and Hamblin MR (2013) Disruptive innovations: new antiinfectives in the age of resistance. Curr Opin Pharmacol 13, 673-7. https://doi.org/10.1016/j.coph.2013.08.012
  29. Tenover FC (2006) Mechanisms of antimicrobial resistance in bacteria. Am J Med 119, S3-S10.
  30. Thaller MC, Borgianni L, Di Lallo G, Chong Y, Lee K, Dajcs J et al. (2011) Metallo-${\beta}$-lactamase production by Pseudomonas otitidis: a speciesrelated trait. Antimicrob Agents Chemother 55, 118-23. https://doi.org/10.1128/AAC.01062-10
  31. Vashist J, Tiwari V, Das R, Kapil A, and Rajeswari MR (2011) Analysis of penicillinbinding proteins (PBPs) in carbapenem resistant Acinetobacter baumannii. Indian J Med Res 133, 332-8.
  32. Vollmer W, Blanot D, and De Pedro MA (2008) Peptidoglycan structure and architecture. FEMS Microbiol Rev 32, 149-67. https://doi.org/10.1111/j.1574-6976.2007.00094.x
  33. Yuan W, Hu Q, Cheng H, Shang W, Liu N, Hua Z et al. (2013) Cell wall thickening is associated with adaptive resistance to amikacin in methicillin-resistant Staphylococcus aureus clinical isolates. J Antimicrob Chemother 68, 1089-96. https://doi.org/10.1093/jac/dks522
  34. Zapun A, Contreras-Martel C, and Vernet T (2008) Penicillin-binding proteins and ${\beta}$-lactam resistance. FEMS Microbiol Rev 32, 361-85. https://doi.org/10.1111/j.1574-6976.2007.00095.x