한국작물학회지 (KOREAN JOURNAL OF CROP SCIENCE)

  • 제59권3호
  • /
  • Pages.263-281
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  • 2014
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  • 0252-9777(pISSN)
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  • 2287-8432(eISSN)
한국작물학회 (The Korean Society of Crop Science)
권호 표지
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옥수수 유전자 기능 분석을 위한 전사인자의 이해

Transcription Factor for Gene Function Analysis in Maize

  • 문준철 (강원대학교 농업생명과학연구원) ;
  • 김재윤 (고려대학교 생명과학대학 생명공학부) ;
  • 백성범 (농촌진흥청 국립식량과학원) ;
  • 권영업 (농촌진흥청 국립식량과학원) ;
  • 송기태 (동국대학교 생명과학과) ;
  • 이병무 (동국대학교 생명과학과)
  • Moon, Jun-Cheol (Agriculture and Life Sciences Research Institute, Kangwon Nat'l Univ.) ;
  • Kim, Jae Yoon (College of Life Science and Biotechnology, Korea Univ.) ;
  • Baek, Seong-Bum (National Institute of Crop Science, RDA) ;
  • Kwon, Young-Up (National Institute of Crop Science, RDA) ;
  • Song, Kitae (Plant Molecular Genetic Lab., Dep. Of Life Science, Dongguk Univ.-Seoul) ;
  • Lee, Byung-Moo (Plant Molecular Genetic Lab., Dep. Of Life Science, Dongguk Univ.-Seoul)
  • 투고 : 2013.09.23
  • 심사 : 2014.05.13
  • 발행 : 2014.09.30
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⟨ 이전 논문 다음 논문 ⟩

초록

전사인자는 식물에서 유전자 발현을 조절하기 위해 필수적이며, 유전자의 promoter나 enhancer 부위에 결합하며, 기본 전사 조절, 전사의 향상, 발달, 세포내 신호전달, 환경에 반응, 세포 주기의 조절 등의 역할을 수행한다. 옥수수 게놈의 염기서열 분석은 전사인자의 유전자 발현 조절의 기작을 이해하는데 도움을 줄 것으로 기대된다. 과거 옥수수의 전체 게놈의 중복으로 옥수수에서 4,000개 이상의 전사인자가 코딩 될 것으로 예상된다. 본 논문에서는 옥수수의 ABI3/VP1, AP2/EREBP, ARF, ARID, AS2, AUX/IAA, BES1, bHLH, bZIP, C2C2-CO-like, C2C2-Dof, C2C2-GATA, C2C2-YABBY, C2H2, E2F/DP, FHA, GARP-ARR-B, GeBP, GRAS, HMG, HSF, MADS, MYB, MYB-related, NAC, PHD, WRKY 전사인자의 특징을 간략히 서술하고, 전사인자의 염기서열을 분석하여 sequence logo를 통하여 각각의 도메인을 표시하였다. 이러한 전사인자 및 관련된 유전자의 분자생물학적 연구는 옥수수에서 중요한 기능을 하는 유전자의 발굴 및 육종을 위한 목표 유전자의 선발에 도움을 줄 것으로 기대된다.

Transcription factors are essential for the regulation of gene expression in plant. They are binding to either enhancer or promoter region of DNA adjacent to the gene and are related to basal transcription regulation, differential enhancement of transcription, development, response to intercellular signals or environment, and cell cycle control. The mechanism in controlling gene expression of transcription can be understood through the assessment of the complete sequence for the maize genome. It is possible that the maize genome encodes 4,000 or more transcription factors because it has undergone whole duplication in the past. Previously, several transcription factors of maize have been characterized. In this review article, the transcription factors were selected using Pfam database, including many family members in comparison with other family and listed as follows: ABI3/VP1, AP2/EREBP, ARF, ARID, AS2, AUX/IAA, BES1, bHLH, bZIP, C2C2-CO-like, C2C2-Dof, C2C2-GATA, C2C2-YABBY, C2H2, E2F/DP, FHA, GARP-ARR-B, GeBP, GRAS, HMG, HSF, MADS, MYB, MYB-related, NAC, PHD, and WRKY family. For analyzing motifs, each amino acid sequence has been aligned with ClustalW and the conserved sequence was shown by sequence logo. This review article will contribute to further study of molecular biological analysis and breeding using the transcription factor of maize as a strategy for selecting target gene.

키워드

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