References
- Adlakha N, Rajagopal R, Kumar S, Reddy VS, Yazdani SS. 2011. Synthesis and characterization of chimeric proteins based on cellulase and xylanase from an insect gut bacterium. Appl. Environ. Microbiol. 77: 4859-4866. https://doi.org/10.1128/AEM.02808-10
- Ali MK, Rudolph FB, Bennett GN. 2005. Characterization of thermostable Xyn10A enzyme from mesophilic Clostridium acetobutylicum ATCC 824. J. Ind. Microbiol. Biotechnol. 32: 12-18. https://doi.org/10.1007/s10295-004-0192-z
- Brune A, Friedrich M. 2000. Microecology of the termite gut: structure and function on a microscale. Curr. Opin. Microbiol. 3: 263-269. https://doi.org/10.1016/S1369-5274(00)00087-4
- Calderon-Cortes N, Quesada M, Watanabe H, Cano- Camacho H, Oyama K. 2012. Endogenous plant cell wall digestion: a key mechanism in insect evolution. Annu. Rev. Evol. Syst. 43: 45-71. https://doi.org/10.1146/annurev-ecolsys-110411-160312
- Cardona CA, Quintero JA, Paz IC. 2010. Production of bioethanol from sugarcane bagasse: status and perspectives. Bioresour. Technol. 101: 4754-4766. https://doi.org/10.1016/j.biortech.2009.10.097
- Cazemier A E, V erdoes JC, v an O oyen A JJ, Op den Camp HJM. 1999. Molecular and biochemical characterization of two xylanase-encoding genes from Cellulomonas pachnodae. Appl. Environ. Microbiol. 65: 4099-4107.
- Chen S, Kaufman MG, Miazgowicz KL, Bagdasarian M. 2013. Molecular characterization of a cold-active recombinant xylanase from Flavobacterium johnsoniae and its applicability in xylan hydrolysis. Bioresour. Technol. 128: 145-155. https://doi.org/10.1016/j.biortech.2012.10.087
- Cheng H-L, Tsai C-Y, Chen H-J, Yang S-S, Chen Y-C. 2009. The identification, purification, and characterization of STXF10 expressed in Streptomyces thermonitrificans NTU-88. Appl. Microbiol. Biotechnol. 82: 681-689. https://doi.org/10.1007/s00253-008-1803-9
- Collins T, Gerday C, Feller G. 2005. Xylanases, xylanase families and extremophilic xylanases. FEMS Microbiol. Rev. 29: 3-23. https://doi.org/10.1016/j.femsre.2004.06.005
- Dheeran P, Nandhagopal N, Kumar S, Jaiswal YK, Adhikari DK. 2012. A novel thermostable xylanase of Paenibacillus macerans IIPSP3 isolated from the termite gut. J. Ind. Microbiol. Biotechnol. 39: 851-860. https://doi.org/10.1007/s10295-012-1093-1
- Flint HJ, Bayer EA, Rincon MT, Lamed R, White BA. 2008. Polysaccharide utilization by gut bacteria: potential for new insights from genomic analysis. Nature Rev. Microbiol. 6: 121-131. https://doi.org/10.1038/nrmicro1817
- Fontes CMGA, Gilbert HJ, Hazlewood GP, Clarke JH, Prates JAM, Mckie VA, et al. 2000. A novel Cellvibrio mixtus family 10 xylanase that is both intracellular and expressed under non-inducing conditions. Microbiology 146: 1959-1967. https://doi.org/10.1099/00221287-146-8-1959
- Gallardo O, Diaz P, Pastor FIJ. 2003. Characterization of a Paenibacillus cell-associated xylanase with high activity on aryl-xylosides: a new subclass of family 10 xylanases. Appl. Microbiol. Biotechnol. 61: 226-233. https://doi.org/10.1007/s00253-003-1239-1
- Gírio FM, Fonseca C, Carvalheiro F, Duarte S, Marques S, Bogel-Lukasik R. 2010. Hemicelluloses for fuel ethanol: a review. Bioresour. Technol. 101: 4775-4800. https://doi.org/10.1016/j.biortech.2010.01.088
- Gupta N, Vohra RM, Hoondal GS. 1992. A thermostable extracellular xylanase from alkalophilic Bacillus sp. NG-27. Biotechnol. Lett. 14: 1045-1046. https://doi.org/10.1007/BF01021056
- Heo S, Kwak J, Oh H-W, Park D-S, Bae KS, Shin D-H, Park H-Y. 2006. Characterization of an extracellular xylanase in Paenibacillus sp. HY-8 isolated from an herbivorous longicorn beetle. J. Microbiol. Biotechnol. 16: 1753-1759.
- Huang S, Sheng P, Zhang H. 2012. Isolation and identification of cellulolytic bacteria from the gut of Holotrichia parallela larvae (Coleoptera: Scarabaeidae). Int. J. Mol. Sci. 13: 2563- 2577. https://doi.org/10.3390/ijms13032563
- Keskar SS, Srinivasan MC, Deshpande VV. 1989. Chemical modification of a xylanase from a thermotolerant Streptomyces: evidence for essential tryptophan and cysteine residues at the active site. Biochem. J. 261: 49-55. https://doi.org/10.1042/bj2610049
- Kim DY, Han MK, Park D-S, Lee JS, Oh H-W, Shin D-H, et al. 2009. Novel GH10 xylanase, with a fibronectin type 3 domain, from Cellulosimicrobium sp. strain HY-13, a bacterium in the gut of Eisenia fetida. Appl. Environ. Microbiol. 75: 7275- 7279. https://doi.org/10.1128/AEM.01075-09
- Kim DY, Han MK, Oh H-W, Bae KS, Jeong T-S, Kim SU, et al. 2010. Novel intracellular GH10 xylanase from Cohnella laeviribosi HY-21: biocatalytic properties and alterations of substrate specificities by site-directed mutagenesis of Trp residues. Bioresour. Technol. 101: 8814-8821. https://doi.org/10.1016/j.biortech.2010.06.023
-
Kim DY, Han MK, Oh H-W, Park D-S, Kim S-J, Lee S-G, et al. 2010. Catalytic properties of a GH10 endo-
$\beta$ -1,4-xylanase from Streptomyces thermocarboxydus HY-15 isolated from the gut of Eisenia fetida. J. Mol. Catal. B Enzym. 62: 32-39. https://doi.org/10.1016/j.molcatb.2009.08.015 -
Kim DY, Ham S-J, Kim HJ, Kim J, Lee M-H, Cho H-Y, et al. 2012. Novel modular endo-
$\beta$ -1,4-xylanase with transglycosylation activity from Cellulosimicrobium s p. s train HY-13 that i s homologous to inverting GH family 6 enzymes. Bioresour. Technol. 107: 25-32. https://doi.org/10.1016/j.biortech.2011.12.106 - Li N, Meng K, Wang Y, Shi P, Luo H, Bai Y, et al. 2008. Cloning, expression, and characterization of a new xylanase with broad temperature adaptability from Streptomyces sp. S9. Appl. Microbiol. Biotechnol. 80: 231-240. https://doi.org/10.1007/s00253-008-1533-z
- Lombard V, Ramulu HG, Drula E, Coutinho PM, Henrissat B. 2014. The carbohydrate-active enzymes database (CAZy) in 2013. Nucleic Acids Res. DOI: 10.1093/nar/gkt1178.
- Lynd LR, Weimer PJ, van Zyl WH, Pretorius IS. 2002. Microbial cellulose utilization: fundamentals and biotechnology. Microbiol. Mol. Biol. Rev. 66: 506-577. https://doi.org/10.1128/MMBR.66.3.506-577.2002
-
Mamo G, Hatti-Kaul R, Mattiasson B. 2006. A thermostable alkaline active endo-
$\beta$ -1,4-xylanase from Bacillus halodurans S7: purification and characterization. Enzyme Microb. Technol. 39: 1492-1498. https://doi.org/10.1016/j.enzmictec.2006.03.040 - MacLeod AM, Lindhorst T, Withers SG, Warren RAJ. 1994. The acid/base catalyst in the exoglucanase/xylanase from Cellulomonas fimi is glutamic acid 127: evidence from detailed kinetic studies of mutants. Biochemistry 33: 6371-6376. https://doi.org/10.1021/bi00186a042
- Morrison M, Pope PB, Denman SE, McSweeney CS. 2009. Plant biomass degradation by gut microbiomes: more of the same or something new? Curr. Opin. Biotechnol. 20: 358-363. https://doi.org/10.1016/j.copbio.2009.05.004
- Oh H-W, Heo S-Y, Kim DY, Park D-S, Bae KS, Park H-Y. 2008. Biochemical characterization and sequence analysis of a xylanase produced by an exo-symbiotic bacterium of Gryllotalpa orientalis, Cellulosimicrobium sp. HY-12. Antonie van Leeuwenhoek 93: 437-442. https://doi.org/10.1007/s10482-007-9210-2
- Polizeli MLTM, Rizzatti ACS, Monti R, Terenzi HF, Jorge JA, Amorim DS. 2005. Xylanases from fungi: properties and industrial applications. Appl. Microbiol. Biotechnol. 67: 577-591. https://doi.org/10.1007/s00253-005-1904-7
- Roberge M, Shareck F, Morosoli R, Kluepfel D, Dupont C. 1999. Characterization of active-site aromatic residues in xylanase A from Streptomyces lividans. Protein Eng. 12: 251-257. https://doi.org/10.1093/protein/12.3.251
-
Shi H, Zhang Y, Huang Y, Wang L, Wang Y, Ding H, Wang F. 2013. A novel highly thermostable xylanase stimulated by
$Ca^{2+}$ from Thermotoga thermarum: cloning, expression and characterization. Biotechnol. Biofuels 6: 26. https://doi.org/10.1186/1754-6834-6-26 - Shi P, Tian J, Yuan T, Liu X, Huang H, Bai Y, et al. 2010. Paenibacillus sp. strain E18 bifunctional xylanase-glucanase with a single catalytic domain. Appl. Environ. Microbiol. 76: 3620-3624. https://doi.org/10.1128/AEM.00345-10
- Singh RK, Tiwari MK, Kim D, Kang YC, Ramachandran P, Lee J-K. 2013. Molecular cloning and characterization of a GH11 endoxylanase from Chaetomium globosum, and its use in enzymatic pretreatment of biomass. Appl. Microbiol. Biotechnol. 97: 7205-7214. https://doi.org/10.1007/s00253-012-4577-z
- Usui K, Suzuki T, Akisaka T, Kawai K. 2003. A cytoplasmic xylanase (XynX) of Aeromonas caviae ME-1 is released from the cytoplasm to the periplasm by osmotic downshock. J. Biosci. Bioeng. 95: 488-495. https://doi.org/10.1016/S1389-1723(03)80050-6
- Wackett LP. 2008. Biomass to fuels via microbial transformations. Curr. Opin. Chem. Biol. 12: 187-193. https://doi.org/10.1016/j.cbpa.2008.01.025
- Yan Q, Hao S, Jiang Z, Chen W. 2009. Properties of a xylanase from Streptomyces matensis being suitable for xylooligosaccharides production. J. Mol. Catal. B Enzym. 58: 72-77. https://doi.org/10.1016/j.molcatb.2008.11.010
- Zhou J, Huang H, Meng K, Shi P, Wang Y, Luo H, et al. 2009. Molecular and biochemical characterization of a novel xylanase from the symbiotic Sphingobacterium sp. TN19. Appl. Microbiol. Biotechnol. 85: 323-333. https://doi.org/10.1007/s00253-009-2081-x
- Zolotnitsky G, Cogan U, Adir N, Solomon V, Shoham G, Shoham Y. 2004. Mapping glycoside hydrolase substrate subsites by isothermal titration calorimetry. Proc. Natl. Acad. Sci. USA 101: 11275-11280. https://doi.org/10.1073/pnas.0404311101
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