DOI QR코드

DOI QR Code

A New Method of Extracting Whole Cell Proteins from Soil Microorganisms Using Pre-treatment of Ammonium Hydroxide

  • Kang, Han-Chul (Department of metabolic engineering, National Academy of Agricultural Science, Rural Development Administration) ;
  • Kim, Jong-Bum (Department of metabolic engineering, National Academy of Agricultural Science, Rural Development Administration) ;
  • Roh, Kyung Hee (Department of metabolic engineering, National Academy of Agricultural Science, Rural Development Administration) ;
  • Yoon, Sang-Hong (Department of metabolic engineering, National Academy of Agricultural Science, Rural Development Administration)
  • Received : 2012.10.22
  • Accepted : 2012.12.30
  • Published : 2013.09.30

Abstract

Efficient extraction of total proteins from soil microorganisms is tedious because of small quantity. In this regard, an improved method for extraction of whole cell proteins is developed from soil microorganisms, Saccharomyces cerevisiae and Pichia pastoris. of which the cell wall are very strong. Pretreatment with NH4OH prior to the final extraction using NaOH/SDS was tried under the basis that ammonium ion was possible to enhance the permeability and/or to weaken the yeast cell walls. The pre-treatment of yeast cells with NH4OH drastically enhanced the protein extraction when it was compared with control (without NH4OH pre-treatment). At the pre-treatment of 0.04 N NH4OH at pH 9.0, about 3 fold of proteins was obtained from p. pastoris. Ammonium hydroxide appears to penetrate into the yeast cell walls more readily at basic pH. The effect of NH4OH pretreatment was pH dependent. The methods developed in this experiment might be applicable for an effective extraction of yeast proteins for the purpose of biochemical studies, especially proteomic analysis.

Keywords

References

  1. Aita GA, Salvi DA, and Walker MS (2010) Enzyme hydrolysis and ethanol fermentation of dilute ammonia pretreated energy cane. Bioresour Technol 102, 4444-8.
  2. Beukes N, Brett I, and Pletschke BI (2011) Effect of alkaline pre-treatment on enzyme synergy for efficient hemicelluloses hydrolysis in sugarcane bagasse. Bioresour Technol 102, 5207-13. https://doi.org/10.1016/j.biortech.2011.01.090
  3. Bradford MM (1976) A rapid sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein dye binding. Anal Biochem 72, 248-54. https://doi.org/10.1016/0003-2697(76)90527-3
  4. Conzelmann A, Riezman H, Desponds C, and Bron C (1988) A major 125 kD membrane glycoprotein of Saccharomyces cerevisiae is attached to the lipid bilayer through an inositol-containing phospholipid. EMBO J 7, 2233-40.
  5. Fujita T, Watanabe H, and Tanaka S (2007) Effects of salt addition on strength and dynamics of hydrophobic interactions. Chem Phys Lett 434, 42-8. https://doi.org/10.1016/j.cplett.2006.11.112
  6. Hartman C and Delgado A (2004) Numerical simulation of the mechanics of a yeast cell under high hydrostatic pressure. J Biomech 37, 977-87. https://doi.org/10.1016/j.jbiomech.2003.11.028
  7. Horwath A and Riezman H (1994) Rapid protein extraction from Saccharomyces cerevisiae. Yeast 10, 1305-10. https://doi.org/10.1002/yea.320101007
  8. Huang GL, Liu MX, and Mei XY (2005) Studies on the hydrolytic condition of B-1,3 glucan from yeast by fluorophore-assisted carbohydrate electrophoresis. Anal Lett 38, 477-85. https://doi.org/10.1081/AL-200047797
  9. Ishiguro J (1998) Genetic control of fission yeast cell wall synthesis: the genes involved in wall biogenesis and their interactions in Schizosaccharomyces pombe. Genes Genet Syst 73, 181-4. https://doi.org/10.1266/ggs.73.181
  10. Karki B, Maurer D, and Jung S (2011) Efficiency of pretreatments for optimal enzymatic saccharification of soybean fiber. Bioresour Technol 102, 6522-8. https://doi.org/10.1016/j.biortech.2011.03.014
  11. Klis FM, Boorsma A, and De Groot PJ (2006) Cell wall construction in Saccharomyces cerevisiae. Yeast 23, 185-202. https://doi.org/10.1002/yea.1349
  12. Kushnirov VV (2000) Rapid and reliable protein extraction from yeast. Yeast 16, 857-60. https://doi.org/10.1002/1097-0061(20000630)16:9<857::AID-YEA561>3.0.CO;2-B
  13. Kwasiborski A, Baji M, Delaplace P, Jardin P, and Jijakli H (2012) Biocontrol proteomics; development of an in situ interaction model and a protein extraction method for a proteomic study of the inhibiting mechanisms of Pichia anomala against Botrytis cenerea. Biocontrol 57, 1-12. https://doi.org/10.1007/s10526-011-9395-1
  14. Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680-5. https://doi.org/10.1038/227680a0
  15. Matsuo Y, Asakawa K, Toda T, and Katayama S (2006) A rapid method for protein extraction from fission yeast. Biosci Biotechnol Biochem 70(8), 1992-4. https://doi.org/10.1271/bbb.60087
  16. Mrsa V and Tanner W (1999) Role of NaOH-extractable cell wall proteins Ccw50, Ccw6p, Ccw7p and Ccw8p (members of the Pir protein family) in stability of the Saccharomyces cerevisiae cell wall. Yeast 15, 813-20. https://doi.org/10.1002/(SICI)1097-0061(199907)15:10A<813::AID-YEA421>3.0.CO;2-Y
  17. Singh MR, Sandip R, and Bellare JR (2009) Influence of cryogenic grinding on release of protein and DNA from Saccharomyces cerevisiae. Int J Food Eng 5, 1556-61.
  18. Stowers CC and Boczko EM (2007) Reliable cell disruption in yeast. Yeast 24, 533-41. https://doi.org/10.1002/yea.1491
  19. Stumm W and Morgan JJ (1981) Aquatic chemistry. An introduction emphasizing chemical equilibria in natural waters. A wiley Interscience publication, New York, USA.
  20. Zhang TT, Lei J, Yang HJ, Xu K, Wang R, and Zhang ZY (2011) An improved method for whole protein extraction from Yeast Saccharomyces cerevisiae. Yeast 28(11), 795-8. https://doi.org/10.1002/yea.1905