Acknowledgement
Supported by : Crop Functional Genomics Center
References
- Bres-Patry C, Lorieux M, Clement G, Bangratz M, Ghesquiere A. 2001. Heredity and genetic mapping of domestication- related traits in a temperate japonica weedy rice. Theor. Appl. Genet. 102: 118-126. https://doi.org/10.1007/s001220051626
- Causse MA, Fulton TM, Cho YG, Ahn SN, Chunwongse J, Wu K, Xiao J, Yu Z, Ronald PC, Harrington SE, Second G, McCouch SR, Tanksley SD. 1994. Saturated molecular map of the rice genome based on an interspecific backcross population. Genetics 138: 1251-1274.
- Chetelat RT and Meglic V. 2000. Molecular mapping of chromosome segments introgressed from Solanum lycopersicoides into cultivated tomato (Lycopersicon esculentum). Theor. Appl. Genet. 100: 232-241. https://doi.org/10.1007/s001220050031
- Cho YC, Eun MY, McCouch SR, Chae YA. 1994. The semi-dwarf gene, sd-1, of rice (Oryza sativa L.). Molecular mapping and marker-assisted selection. Theor. Appl. Genet. 89: 54-59.
- Cho YC, Chung TY, Suh HS. 1995. Genetic characteristics of Korean weedy rice (Oryza sativa L.) by RFLP analysis. Euphytica 86: 103-110. https://doi.org/10.1007/BF00022015
- Eshed Y and Zamir D. 1994. Introgressions from Lycopersicon pennellii can improve the soluble solids yield of tomato hybrids. Theor. Appl. Genet. 88: 891-897. https://doi.org/10.1007/BF01254002
- Fray A, Nesbitt TC, Grandillo S, Knaap E, Cong B, Liu J, Meller J, Elber R, Alpert KB, Tanksley SD. 2000. fw2.2: a quantitative trait locus key to the evolution of tomato fruit size. Science 289: 85-88. https://doi.org/10.1126/science.289.5476.85
- Fukuoka S, Newingham M.C.V., Ihitiaq M, Nagamine T, Kawase M, Okuno K. 2005. Identification and mapping of two new loci for hybrid breakdown in cultivated rice. Rice Genet. News. 22: 29-31.
- Jiang W, Chun SH, Piao R, Chin JH, Jin YM, Lee JY, Qiao Y, Han L, Piao Z and Koh HJ. 2008. Fine mapping and candidate gene analysis of hwh1 and hwh2, a set of complementary genes controlling hybrid breakdown in rice. Theor. Appl. Genet. 116(8): 1117-1127. https://doi.org/10.1007/s00122-008-0740-4
- Kubo T and Yoshimura A. 2002. Genetic basis of hybrid breakdown in a japonica/indicacross of rice, Oryza sativa L. Theor. Appl. Genet. 105(8): 906-911. https://doi.org/10.1007/s00122-002-1059-1
- Lippman ZB, Semel Y, Zamir D. 2007. An integrated view of quantitative trait variation using tomato interspecfic introgression lines. Current Opi. in Genet. & Dev. 17:1-8. https://doi.org/10.1016/j.gde.2006.12.013
- Liu GM, Li WT, Zeng RZ, Zhang ZM and Zhang Q. 2004. Identification of QTLs on substituted segments in single segment substitution lines of rice. Acta. Genet. Sin. 31: 1395-1400.
- Liu T, Mao D, Zhang S, XuC, Xing Y. 2009. Fine mapping spp1, a QTL controlling the number of spikelets per panicle, to a BAC clone in rice (Oryza sativa). Theor. Appl. Genet. 118(8): 1509-1517. https://doi.org/10.1007/s00122-009-0999-0
- Matsubara K, Ando T, Mizubayashi T, Ito S, Yano M. 2007. Identification and linkage mapping of complementary recessive genes causing hybrid breakdown in an intraspecific rice cross. Theor. Appl. Genet. 115: 179-186. https://doi.org/10.1007/s00122-007-0553-x
- McCouch SR and Doerge RW. 1995.QTL mapping in rice. Trends Genet. 11: 482-487. https://doi.org/10.1016/S0168-9525(00)89157-X
- Nelson JC. 1997. QGENE: software for marker-based genomic analysis and breeding, Molecular Breed. 3: 239-245. https://doi.org/10.1023/A:1009604312050
- Oh CS, Choi YH, Lee SJ, Yoon DB, Moon HP and AhnSN.2004. Mapping of Quantitative Trait Loci for Cold Tolerance in Weedy Rice. Breeding Sci. 54: 373-380. https://doi.org/10.1270/jsbbs.54.373
- Oh CS. 2009. QTL mapping of agronomic and cold tolerance traits using an introgression line population from a cross between Milyang23 and a weedy rice Hapcheonaengmi3. Ph. D. Dissertation in Chungnam National University, Republic of Korea.
- Panaud O, Chen X and McCouchSR. 1996. Development of microsatellite markers and characterization of simple sequence length polymorphism (SSLP) in rice (Oryza sativa L.). Mol. Gen. Genet. 252: 597-607.
- Paran I and Zamir D. 2003. Quantitative traits in plant: beyond the QTL. Trends Genet. 19: 303-306. https://doi.org/10.1016/S0168-9525(03)00117-3
- Johan D. Peleman and JeroenRouppe van der Voort. 2003. Breeding by design. Trends Plant Sci. 8: 330-334. https://doi.org/10.1016/S1360-1385(03)00134-1
- Suh HS and Ha WG. 1994. Character variations of Korean weedy rice. Rice Genetics Newletter 11: 69-72.
- Suh HS, Sato YI, Morishima H. 1997. Genetic characterization of weedy rice (Oryza sativa L.) based on morphophysiology, isozymes and RAPD markers. Theor. Appl. Genet. 94: 316-321. https://doi.org/10.1007/s001220050417
- Suh JP, Ahn SN, Moon HP and Suh HS. 1999. QTL analysis of low temperature germinability in a weedy rice (Oryza sativa L.). Korean J. Breed. 31(3): 261-267.
- Takahashi Y, Shomura A, Sasaki T. and Yano M. 2001. Hd6, a rice quantitative trait locusinvolved in photoperiod sensitivity, encodes the alpha subunit of protein kinase CK2. Proc. Natl. Acad. Sci. U.S.A. 98: 7922-7927. https://doi.org/10.1073/pnas.111136798
- Tang LH and Morishima H. 1997. Genetic characterization of weedy rices and inference on their orgins. Breeding Sci. 47: 153-160.
- Yano M and Sasaki T. 1997. Genetic and molecular dissection of quantitative traits in rice. Plant Mol. Biol. 35: 145-133. https://doi.org/10.1023/A:1005764209331
- Yano M, Katayose Y, Ashikari M, Yamanouchi U, Monna L, Fuse T, Baba T, Yamamoto K, Umehara Y, Naquamira Y, Sasaki T. 2000. Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS. The Plant Cell 12(12): 2473-2484. https://doi.org/10.1105/tpc.12.12.2473