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Identification of Ruditapes philippinarum and Meretrix lusoria Larvae Using Single Cell PCR Analysis and Microscopic Observation

Single Cell PCR과 현미경을 통한 바지락 및 백합 유생의 동정

  • Jung, Seung-Won (South Sea Environment Research Department, KORDI) ;
  • Kim, Chang-Soo (Korea Institute of Coastal Ecology, Inc.) ;
  • Yoo, Jae-Won (Korea Institute of Coastal Ecology, Inc.) ;
  • Kim, Young-Ok (South Sea Environment Research Department, KORDI) ;
  • Lee, Jin-Hwan (Department of Green Life Science College of Natural Sciences Sangmyung University) ;
  • Hong, Jae-Sang (Department of Oceanography, College of Natural Sciences Inha University)
  • 정승원 (한국해양연구원 남해특성연구부) ;
  • 김창수 (한국연안환경생태연구소) ;
  • 유재원 (한국연안환경생태연구소) ;
  • 김영옥 (한국해양연구원 남해특성연구부) ;
  • 이진환 (상명대학교 자연과학대학 그린생명과학과) ;
  • 홍재상 (인하대학교 자연과학대학 해양과학과)
  • Received : 2010.05.07
  • Accepted : 2010.08.28
  • Published : 2010.09.30

Abstract

Single cell PCR analysis and light and scanning electron microscopic techniques were utilized to identify free living bivalve larvae in the coastal waters of Tae-an, on the west coast of Korea. Through DNA sequencing, venerid clam larvae were isolated and identified as Ruditapes philippinarum (99% similarity) and Meretrix lusoria (99%). Under microscopic observation, the D-veliger stage of R. philippinarum exhibited symmetrical shoulder angles and an elliptical ventral form. In contrast, M. lusoria displayed asymmetrical shoulder angles and a round ventral form in the umbonal stage. Size of the R. philippinarum larvae was $156{\pm}22{\mu}m$ in length, $126{\pm}12{\mu}m$ in height, $92{\pm}14{\mu}m$ in width with a length: height ratio of 1.23. Meretrix lusoria was $202{\pm}44{\mu}m$ in length, $161{\pm}35{\mu}m$ in height, $96{\pm}38{\mu}m$ in width with a length: height ratio of 1.25. Experimental results indicate that morphological and molecular characteristics provide evidence for the larval identification of these two venerid clam larvae species in nature.

Keywords

References

  1. 김완수 (1986) 가로림만 바지락의 성장, 사망 및 생산. 석사학위논문, 충남대학교, 36 p
  2. 김효진 (2005) 인천 선재도산 바지락, Ruditapes philippinarum의 환경 요인의 차이에 의한 성장과 산란 및 가입에 대한 비교 연구. 석사학위논문, 인하대학교, 63 p
  3. 송재희, 김치홍, 박성우, 유진하, 조영조 (2008) 한국 서해안 백합 Meretrix lusoria의 생물학적 활성요인과 계절성. 한국양식학회지 21:111-122
  4. 유성규 (2000) 천해양식. 구덕출판사, 부산, 626 p
  5. 유성규, 정유정, 유호영 (1978) 연안산 중요 조개류의 증식에 관한 생물학적 연구. 6. 바지락의 산지별 특징. 부산수대연보 18:89-94
  6. 윤성봉 (1992) 통영 안정리 인접 바지락 자원의 개체군 역학적 연구. 석사학위논문, 부산수산대학, 34 p
  7. 조수근, 장창익, 손명호 (1995) 군산 연안 양식 바지락(Tapes philippinarum)의 형태와 성장에 관한 연구. 군산대학교논문집 7:36-38
  8. 최신석 (1975) 대합(Meretrix lusoria)과 가무락(Cyclina sinensis)의 초기발생 및 성장에 관한 비교연구. 한국수산학회지 8:185-195
  9. 허영백, 허성범 (2000) 4종 조개류 유생의 발생과 성장. Journal of Aquaculture 13:119-128
  10. 해양수산부 (2006) 해양수산통계연보. 334 p
  11. 해양수산부 (2007) 동.서.제주해역 바다목장화 개발 연구 용역. BSPM42400-1897-3, 562 p
  12. 浜口昌巳 (1999) 瀨戶內海アサリ漁場生態調査のための種判別技術の開發. 農林水産技術會議硏究成果334 魚介類の初期生態解明のための種判別技術の開發. 東京, pp 66-77
  13. 全國沿岸漁業振興開發協會 (1996) 沿岸漁場整備開發事業 增殖場造成計劃指針 坪城8年度版 社團法人 全國沿岸漁業振興開發協會. 東京, 316 p
  14. Canapa A, Schiaparelli S, Marota I, Barucca M (2003) Molecular data from the 16S rRNA gene for the phylogeny of Veneridae (Mollusca: Bivalvia). Mar Biol 142:1125-1130
  15. Charrel RN, Micco DP, de Lamballerie X (1999) Convenient method to improve the graphical quality of phylogenetic trees computed by the MEGA program. Biotechniques 27:702-704
  16. Chen A, Li Z, Feng G (2009) Phylogenetic relationships of the genus Meretrix (Mollusca: Veneridae) based on mitochondrial COI gene sequences. Zoo Res 30:233-239 https://doi.org/10.3724/SP.J.1141.2009.03233
  17. Chew KK (1989) Manila clam biology and fishery development in Western North America. In: Manzi JJ, Castagna M (eds) Clam mariculture in North America. Elsevier, Amsterdam, pp 243-261
  18. Chew KK (1990) Global bivalve shellfish introductions. World Aquac 21:9-22
  19. Chung EY (2007) Oogenesis and sexual maturation in Meretrix lusoria (R1798) (Bivalvia: Veneridae) in Western Korea. J Shellfish Res 26(1):71-80 https://doi.org/10.2983/0730-8000(2007)26[71:OASMIM]2.0.CO;2
  20. Chung EY, Hur YB, Shin MS, Kim YM (2005) Reproductive biology of the female manila clam, Ruditapes philippinarum (Bivalvia: Veneridae) on the west coast of Korea. Kor J Malacol 21:1-11
  21. Choi KH, Park GM, Chung EY (2005) Ovarian Maturation in Female Ruditapes philippinarum on the West Coast of Korea. Development and Reproduction 9:123-134
  22. Evseev GA, Kolotukkina NK, Semenikhana OY (2001) Shell morphogenesis of several venerid bivalves. J Shellfish Res 20:1127-1284
  23. Fernandez A, Garcia T, Asensio L, Rodriguez MA, Gonzalez I, Cespedes A, Hernandez PE, Martín R (2000) Identification of the Clam species Ruditapes decussates (Grooved Carpet Shell), Venerupis pullastra (Pullet Carpet Shell), and Ruditapes philippinarum (Japanese Carpet Shell) by PCR-RFLP. J Agric Food Chem 48:3336-3341 https://doi.org/10.1021/jf0002185
  24. Garland ED, Zimmer CA (2002) Techniques for the identification of bivalve larvae. Mar Ecol Prog Ser 225:299-310 https://doi.org/10.3354/meps225299
  25. Gosner KL (1971) Guide to identification of marine and estuarine invertebrates, Cape Hatteras to the Bay of Fundy. John Wiley & Sons, New York, 693 p
  26. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41:95-98
  27. Hare MP, Palumbi SR, Butman CA (2000) Single-step species identification of bivalve larvae using multiplex polymerase chain reaction. Mar Biol 137:953-961 https://doi.org/10.1007/s002270000402
  28. Heath DD, Rawson PD, Hilbish TJ (1995) PCR-based nuclear markers identify alien blue mussel (Mytilus spp.) genotypes on the west coast of Canada. Can J Fish Aquat Sci 52:2621-2627 https://doi.org/10.1139/f95-851
  29. Ho JS, Zheng GX (1994) Ostrincola koe (Copepoda, Myicolidae) and mass mortality of cultured hard clam (Meretrix meretrix) in China. Hydrobiologia 284:169-173 https://doi.org/10.1007/BF00006888
  30. Holland DA, Chew KK (1974) Reproductive cycle of the Manila clam (Venerupis japonica) from Food Canal, Washington. Proc. Natl Shellfish Assoc 64:53-58
  31. Hur YB (2005) Comparison of development and larval growth of four venerid clams. J World Aquac Soc 36:179-187 https://doi.org/10.1111/j.1749-7345.2005.tb00383.x
  32. Jayabal R, Kalyani M (1986) Biochemical studies in the hard clam Meretrix meretrix (L.) from Vellar estuary, east coast of India. Indian J Mar Sci 15:63-64
  33. Jung SW, Joo HM, Park JS, Lee JH (2010) Development of a rapid and effective method for preparing delicate dinoflagellates for scanning electron microscopy. J Appl Phycol 22:313-317 https://doi.org/10.1007/s10811-009-9461-6
  34. Kai AKL, Cheung YK, Yeung PKK, Wong JTY (2006) Development of single-cell PCR methods for the Raphidophyceae. Harmful Algae 5:649-657 https://doi.org/10.1016/j.hal.2006.01.002
  35. Liu BZ, Dong B, Tang BJ, Zhang T, Xiang JH (2006) Effect of stocking density on growth, settlement and survival of clam larvae, Meretrix meretrix. Aquaculture 258:344-349 https://doi.org/10.1016/j.aquaculture.2006.03.047
  36. Lutz R, Goodsell J, Castagna M, Chapman S and Newell C, Hidu H, Mann R, Jablonski D, Kennedy V, Siddall S, Goldberg R, Beattie H, Falmagne C, Chestnut A, Partridge A (1982) Preliminary observations on the usefulness of hinge structures for identification of bivalve larvae. J Shellfish Res 2:65-70
  37. Martel A, Hynes TM, Buckland-Nicks J (1995) Prodissoconch morphology, planktonic shell growth, and site at metamorphosis in Dreissena polymorpha. Can J Zool 73:1835-1844 https://doi.org/10.1139/z95-216
  38. Nichols SJ, Black MG (1994) Identification of larvae: the zebramussel (Dreissena polymorpha), quaggamussel (Dreissena rosteriformis bugensis), and Asian clam (Corbicula fluminea). Can J Zool 72:406-417 https://doi.org/10.1139/z94-057
  39. Pan BP, Wu Q, Zhang SP, Song LS, Bu WJ (2006) Molecular phylogeny of Meretrix (Mollusca, Bivalvia) based on 16S rRNA and ITS1 sequences. Oceanol Limnol Sin 37:342-347
  40. Rice EL (1990) Nucleotide sequence of the 18S ribosomal RNA gene from the Atlantic sea scallop Placopecten magellanicus (Gmelin, 1791). Nucleic Acids Res 18:5551 https://doi.org/10.1093/nar/18.18.5551
  41. Sakai A, Sekiguchi H (1992) Identification of planktonic late-stage larval and settled bivalves in a tidal flat. Bull Jpn Soc Fish Oceanogr 56:410-425
  42. Sastry AN (1965) The development and external morphology of pelagic larval and post-larval stages of the bay Scallop, Aequipecten irradians concentricus say, reared in the laboratory. Bull Mar Sci 15:417-435
  43. Sekiguchi H, Uchida M, Sakai A (1995) Post-settlement processes determining the features of bivalve assemblages in tidal flats. Benthos Res 49:1-14
  44. Underwood AJ, Fairweather PG (1989) Supply-side ecology and benthic marine assemblages. Trends Ecol Evol 4:16-20 https://doi.org/10.1016/0169-5347(89)90008-6
  45. Yap WG (1977) Population biology of the Japanese littleneck clam, Tapes philippinarum in Kaneohe Bay, Oahu, Hawaiian Islands. Pacif Sci 31:223-244