Journal of Plant Biotechnology

The Korean Society of Plant Biotechnology (한국식물생명공학회)
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Current status of Ac/Ds mediated gene tagging systems for study of rice functional genomics in Korea

Ac/Ds 삽입 변이체를 이용한 벼 유전자 기능 연구

  • Lee, Gang-Seob (Genomics Division, National Academy of Agricultural Science, RDA) ;
  • Park, Sung-Han (Genomics Division, National Academy of Agricultural Science, RDA) ;
  • Yun, Do-Won (Genomics Division, National Academy of Agricultural Science, RDA) ;
  • Ahn, Byoung-Ohg (Genomics Division, National Academy of Agricultural Science, RDA) ;
  • Kim, Chang-Kug (Genomics Division, National Academy of Agricultural Science, RDA) ;
  • Han, Chang-Deok (Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University) ;
  • Yi, Gi-Hwan (Functional Crop Resource Development Division, Department of Functional Crop, National Institute of Crop Science, RDA) ;
  • Park, Dong-Soo (Functional Crop Resource Development Division, Department of Functional Crop, National Institute of Crop Science, RDA) ;
  • Eun, Moo-Young (Kyungpook National University & Gunwi Agriculture Technology Center) ;
  • Yoon, Ung-Han (Genomics Division, National Academy of Agricultural Science, RDA)
  • Received : 2010.04.18
  • Accepted : 2010.04.29
  • Published : 2010.06.30
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Abstract

Rice is the staple food of more than 50% of the worlds population. Cultivated rice has the AA genome (diploid, 2n=24) and small genome size of only 430 megabase (haploid genome). As the sequencing of rice genome was completed by the International Rice Genome Sequencing Project (IRGSP), many researchers in the world have been working to explore the gene function on rice genome. Insertional mutagenesis has been a powerful strategy for assessing gene function. In maize, well characterized transposable elements have traditionally been used to clone genes for which only phenotypic information is available. In rice endogenous mobile elements such as MITE and Tos (Hirochika. 1997) have been used to generate gene-tagged populations. To date T-DNA and maize transposable element systems has been utilized as main insertional mutagens in rice. A main drawback of a T-DNA scheme is that Agrobacteria-mediated transformation in rice requires extensive facilities, time, and labor. In contrast, the Ac/Ds system offers the advantage of generating new mutants by secondary transposition from a single tagged gene. Revertants can be utilized to correlate phenotype with genotype. To enhance the efficiency of gene detection, advanced gene-tagging systems (i.e. activation, gene or enhancer trap) have been employed for functional genomic studies in rice. Internationally, there have been many projects to develop large scales of insertionally mutagenized populations and databases of insertion sites has been established. Ultimate goals of these projects are to supply genetic materials and informations essential for functional analysis of rice genes and for breeding using agronomically important genes. In this report, we summarize the current status of Ac/Ds-mediated gene tagging systems that has been launched by collaborative works from 2001 in Korea.

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References

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