과제정보
연구 과제 주관 기관 : Agricultural R&D Promotion Center, Seoul National University
참고문헌
- Benson, G. (1999). Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res. 27, 573-580 https://doi.org/10.1093/nar/27.2.573
- Boore, J.L. (1999) Animal mitochondrial genomes. Nucleic Acids Res. 27, 1767-1780 https://doi.org/10.1093/nar/27.8.1767
- Boore, J.L., and Brown, W.M. (1998). Big trees from little genomes: mitochondrial gene order as a phylogenetic tool. Curr. Opin. Genet. Dev. 8, 668-674 https://doi.org/10.1016/S0959-437X(98)80035-X
- Boore, J.L., Collins, T.M., Stanton, D., Daehler, L.L., and Brown, W.M. (1995). Deducing the pattern of arthropod phylogeny from mitochondrial DNA rearrangements. Nature 376, 163-165 https://doi.org/10.1038/376163a0
- Boore, J.L., Macey, J.R., and Medina, M. (2005). Sequencing and comparing whole mitochondrial genomes of animals. Meth. Enzymol. 395, 311-348 https://doi.org/10.1016/S0076-6879(05)95019-2
- Carver, M., Gross, G., and Woodward, T. (1991). Hemiptera (bugs, leafhoppers, cicadas, aphids, scale insects etc.). In: CSIRO (ed) The insects of Australia. A textbook for students and research workers, Vol. I, 2nd ed. (Carlton: Melbourne University Press), p. 429
- Castresana, J. (2000). Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 17, 540-552 https://doi.org/10.1093/oxfordjournals.molbev.a026334
- Cobben, R.H. (1978). Evolutionary trends in Heteroptera. Part II. Mouthpart-structures and feeding strategies (The Netherlands, Wageningen: Mededelingen Landbouwhogeschool)
- Dotson, E.M., and Beard, C.B. (2001). Sequence and organization of the mitochondrial genome of the Chagas disease vector, Triatoma dimidiata. Insect Mol. Biol. 10, 205-215 https://doi.org/10.1046/j.1365-2583.2001.00258.x
- Dowton, M. (1999). Relationships among the cyclostome braconid (Hymenoptera: Braconidae) subfamilies inferred from a mitochondrial tRNA gene rearrangement. Mol. Phylogenet. Evol. 11, 283-287 https://doi.org/10.1006/mpev.1998.0580
- Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791 https://doi.org/10.2307/2408678
- Folmer, O., Black, M., Lutz, R., and Vrijenhoek, R. (1994). DNA primers for amplification of mitochondrial cytochrome c oxydase subunit I from diverse metazoan invertebrates. Mol. Marine Biol. Biotechnol. 3, 294-299
- Goodchild, A. (1966). Evolution of the alimentary canal in the Hemiptera. Biol. Rev. 41, 97-140 https://doi.org/10.1111/j.1469-185X.1966.tb01540.x
- Hamilton, K. (1981). Morphology and evolution of the rhynchotan head (Insecta: Hemiptera, Homoptera). Can. Entomol. 113, 953-974 https://doi.org/10.4039/Ent113953-11
- Hennig, W. (1981). Insect phylogeny (New York: J Wiley and Sons)
- Hoebeke, E.R., and Carter, M.E. (2003).Halyomorpha halys(Heteroptera: Pentatomidae): a polyphagous plant pest from Asia newly detected in North America. Proc. Entomol. Soc. Wash. 105, 225-237
- Hua, J., Li, M., Dong, P., Cui, Y., Xie, Q., and Bu, W. (2008). Comparative and phylogenomic studies on the mitochondrial genomes of Pentatomomorpha (Insecta: Hemiptera: Heteroptera). BMC Genomics 9, 610 https://doi.org/10.1186/1471-2164-9-610
- Huelsenbeck, J.P., and Ronquist, F. (2001). MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17, 754-755 https://doi.org/10.1093/bioinformatics/17.8.754
- Jermiin, L.S., and Crozier, R.H. (1994). The cytochrome b region in the mitochondrial DNA of the ant Tetraponera rufoniger: sequence divergence in Hymenoptera may be associated with nucleotide content. J. Mol. Evol. 38, 282-294 https://doi.org/10.1007/BF00176090
- Kambhampati, S., and Smith, P.T. (1995). PCR primers for the amplification of four insect mitochondrial gene fragments. Insect Mol. Biol. 4, 233-236 https://doi.org/10.1111/j.1365-2583.1995.tb00028.x
- Kim, K.-G., Hong, M.Y., Kim, M.J., Im, H.H., Kim, M.I., Bae, C.H., Seo, S.J., Lee, S.H., and Kim, I. (2009). Complete mitochondrial genome sequence of the yellow-spotted long-horned beetle Psacothea hilaris (Coleoptera: Cerambycidae) and phylogenetic analysis among coleopteran insects. Mol. Cells 27, 429-441 https://doi.org/10.1007/s10059-009-0064-5
- Kristensen, N. (1973). The phylogeny of hexapod 'orders.' A critical review of recent accounts. J. Zool. Syst. Evol. Res. 13, 1-44 https://doi.org/10.1111/j.1439-0469.1975.tb00226.x
- Kristensen, N. (1981). Phylogeny of insect orders. Annu. Rev. Entomol. 26, 135-157 https://doi.org/10.1146/annurev.en.26.010181.001031
- Kristensen, N.P. (1991). Phylogeny of extant hexapods, In: CSIRO (ed) The insects of Australia. A textbook for students and research workers, Vol. I, 2nd ed. (Carlton: Melbourne University Press), p. 125
- Kukalova-Peck, J. (1991). Fossil history and the evolution of hexapod structures. In: CSIRO (ed) The insects of Australia. A textbook for students and research workers, Vol. I, 2nd ed. (Carlton: Melbourne University Press), p. 141
- Lee, W., Park, J., Choi, J., Jung, K., Park, B., Kim, D., Lee, J., Ahn, K., Song, W., Kang, S., et al. (2009). IMGD: an integrated platform supporting comparative genomics and phylogenetics of insect mitochondrial genomes. BMC Genomics 10, 148 https://doi.org/10.1186/1471-2164-10-148
- Lessinger, A.C., Martins Junqueira, A.C., Lemos, T.A., Kemper, E.L., da Silva, F.R., Vettore, A.L., Arruda, P., and Azeredo-Espin, A.M. (2000). The mitochondrial genome of the primary screwworm fly Cochliomyia hominivorax (Diptera: Calliphoridae). Insect Mol. Biol. 9, 521-529 https://doi.org/10.1046/j.1365-2583.2000.00215.x
- Lowe, T.M., and Eddy, S.R. (1997). tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25, 955-964 https://doi.org/10.1093/nar/25.5.955
- Muraji, M., and Tachikawa, S. (2000). Phylogenetic analysis of water striders (Hemiptera:Gerroidea) based on partial sequences of mitochondrial and nuclear ribosomal RNA genes. Entomol. Sci. 3, 615-626
- Muraji, M., Kawasaki, K., and Shimizu, T. (2000). Phylogenetic utility of nucleotide sequences of mitochondrial 16S ribosomal RNA and cytochrome b genes in anthocorid bugs (Heteroptera: Anthocoridae). Appl. Entomol. Zool. (Jpn.) 35, 293-300 https://doi.org/10.1303/aez.2000.293
- Nylander, J.A., Ronquist, F., Huelsenbeck, J.P., and Nieves-Aldrey, J.L. (2004). Bayesian phylogenetic analysis of combined data. Syst. Biol. 53, 47-67 https://doi.org/10.1080/10635150490264699
- Poisson, R., and Pesson, P. (1951). Super-ordre des Hemipteroides (Hemiptera Linne, 1758, Rhynchota Burrueister, 1835), In: Grasse P-P (ed) Traite de Zoologic: Anatomic, Systematique, Biologic. Tome X. Insectes superieurs, et Hemipteroides.2 vols (Masson, Paris), pp. 1-975, 976-1948
- Posada, D., and Crandall, K.A. (1998). MODELTEST: testing the model of DNA substitution. Bioinformatics 14, 817-818 https://doi.org/10.1093/bioinformatics/14.9.817
- Rawlings, T.A., Collins, T.M., and Bieler, R. (2001). A major mitochondrial gene rearrangement among closely related species. Mol. Biol. Evol. 18, 1604-1609 https://doi.org/10.1093/oxfordjournals.molbev.a003949
- Rokas, A., and Holland, P.W. (2000). Rare genomic changes as a tool for phylogenetics. Trends Ecol. Evol. 15, 454-459 https://doi.org/10.1016/S0169-5347(00)01967-4
- Ross, H. (1965). A textbook of entomology, 3rd ed. (New York: Wiley)
- Schuh, R.T., and Slater, J.A. (1995). True bugs of the world (Hemiptera, Heteroptera): Classification and Natural History. (New York: Cornell University Press)
- Scudder, G. (1973). Recent advances in the higher systematics and phylogenetic concepts in entomology. Can. Entomol. 105, 1251-1263 https://doi.org/10.4039/Ent1051251-9
- Shao, R., and Barker, S.C. (2003). The highly rearranged mitochondrial genome of the plague thrips, Thrips imaginis (Insecta: Thysanoptera): convergence of two novel gene boundaries and an extraordinary arrangement of rRNA genes. Mol. Biol. Evol. 20, 362-370 https://doi.org/10.1093/molbev/msg045
- Stewart, J.B., and Beckenbach, A.T. (2005). Insect mitochondrial genomics: the complete mitochondrial genome sequence of the meadow spittlebug Philaenus spumarius (Hemiptera: Auchenorrhyncha: Cercopoidae). Genome 48, 46-54 https://doi.org/10.1139/g04-090
- Swofford, D.L. (2002). PAUP*: Phylogenetic analysis using parsimony (*and other methods) Sunderland: Sinauer Associates
- Szelegiewicz, H. (1971). Autapomorphous wing characters in the recent subgroups of Sternorrhyncha (Hemiptera) and their significance in the interpretation of the Paleozoic members of the group. Ann. Zool. Fenn. 29, 1-67.
- Thao, M.L., Baumann, L., and Baumann, P. (2004). Organization of the mitochondrial genomes of whiteflies, aphids, and psyllids (Hemiptera, Sternorrhyncha). BMC Evol. Biol. 4, 25 https://doi.org/10.1186/1471-2148-4-25
- Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., and Higgins, D.G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25, 4876-4882 https://doi.org/10.1093/nar/25.24.4876
- von Dohlen, C.D., and Moran, N.A. (1995). Molecular phylogeny of the Homoptera: a paraphyletic taxon. J. Mol. Evol. 41, 211-223 https://doi.org/10.1007/BF00170675
- Wootton, R.J., and Betts, C.R. (1986). Homology and function in the wings of Heteroptera. Syst. Entomol. 11, 389-400 https://doi.org/10.1111/j.1365-3113.1986.tb00191.x
피인용 문헌
- Systematics and Evolution of Heteroptera: 25 Years of Progress vol.56, pp.None, 2011, https://doi.org/10.1146/annurev-ento-120709-144833
- The Complete Mitochondrial Genome and Novel Gene Arrangement of the Unique-Headed Bug Stenopirates sp. (Hemiptera: Enicocephalidae) vol.7, pp.1, 2009, https://doi.org/10.1371/journal.pone.0029419
- Phylogenomics of Hemiptera (Insecta: Paraneoptera) based on mitochondrial genomes vol.38, pp.1, 2009, https://doi.org/10.1111/j.1365-3113.2012.00660.x
- The complete mitochondrial genomes of two rice planthoppers, Nilaparvata lugens and Laodelphax striatellus: conserved genome rearrangement in Delphacidae and discovery of new characteristics of a vol.14, pp.None, 2009, https://doi.org/10.1186/1471-2164-14-417
- Identificação morfológica e molecular de Helicoverpa armigera (Lepidoptera: Noctuidae) e ampliação de seu registro de ocorrência no Brasil vol.48, pp.6, 2009, https://doi.org/10.1590/s0100-204x2013000600015
- The complete mitochondrial genome of Dolycoris baccarum (Insecta: Hemiptera: Pentatomidae) vol.24, pp.5, 2009, https://doi.org/10.3109/19401736.2013.766182
- Mitochondrial Genomes of Two Barklice, Psococerastis albimaculata and Longivalvus hyalospilus (Psocoptera: Psocomorpha): Contrasting Rates in Mitochondrial Gene Rearrangement between Major Lineage vol.8, pp.4, 2009, https://doi.org/10.1371/journal.pone.0061685
- The complete mitochondrial genome of Cervaphis quercus (Insecta: Hemiptera: Aphididae: Greenideinae) vol.21, pp.3, 2009, https://doi.org/10.1111/1744-7917.12112
- A pest alien invasion in progress: potential pathways of origin of the brown marmorated stink bug Halyomorpha halys populations in Italy vol.88, pp.1, 2009, https://doi.org/10.1007/s10340-014-0634-y
- The Complete Mitochondrial Genome of Corizus tetraspilus (Hemiptera: Rhopalidae) and Phylogenetic Analysis of Pentatomomorpha vol.10, pp.6, 2015, https://doi.org/10.1371/journal.pone.0129003
- Comparative mitogenomic analysis of the superfamily Pentatomoidea (Insecta: Hemiptera: Heteroptera) and phylogenetic implications vol.16, pp.1, 2009, https://doi.org/10.1186/s12864-015-1679-x
- Hemipteran Mitochondrial Genomes: Features, Structures and Implications for Phylogeny vol.16, pp.12, 2009, https://doi.org/10.3390/ijms160612382
- The Complete Mitochondrial Genome of Mindarus keteleerifoliae (Insecta: Hemiptera: Aphididae) and Comparison with Other Aphididae Insects vol.16, pp.12, 2009, https://doi.org/10.3390/ijms161226219
- Application of RNA-seq for mitogenome reconstruction, and reconsideration of long-branch artifacts in Hemiptera phylogeny vol.6, pp.None, 2016, https://doi.org/10.1038/srep33465
- COI-based DNA barcoding of some species of Pentatomidae from North India (Hemiptera: Heteroptera) vol.28, pp.5, 2017, https://doi.org/10.1080/24701394.2016.1180513
- Complete Mitochondrial Genome of Dinorhynchus dybowskyi (Hemiptera: Pentatomidae: Asopinae) and Phylogenetic Analysis of Pentatomomorpha Species vol.18, pp.2, 2009, https://doi.org/10.1093/jisesa/iey031
- Genetic diversity of the brown marmorated stink bug Halyomorpha halys in the invaded territories of Europe and its patterns of diffusion in Italy vol.20, pp.4, 2018, https://doi.org/10.1007/s10530-017-1611-1
- Halyomorpha halys (Hemiptera: Pentatomidae) Genetic Diversity in North America and Europe vol.10, pp.6, 2009, https://doi.org/10.3390/insects10060174
- Comparative analysis of twelve mitogenomes of Caliscelidae (Hemiptera: Fulgoromorpha) and their phylogenetic implications vol.9, pp.None, 2009, https://doi.org/10.7717/peerj.12465
- Jekyll or Hyde? The genome (and more) of Nesidiocoris tenuis, a zoophytophagous predatory bug that is both a biological control agent and a pest vol.30, pp.2, 2021, https://doi.org/10.1111/imb.12688