과제정보
연구 과제 주관 기관 : Academy of Sciences of the Czech Republic, Ministry of Education of the Czech Republic
참고문헌
- Albiez, H., Cremer, M., Tieri, C., Vecchio, L., Schermelleh, L., Dittrich, S., Küpper, K., Joffe, B., Thormeyer, T., von Hase, J., et al. (2006). Chromatin domains and the interchromatin compartment form structurally defined and functionally interacting nuclear networks. Chrom. Res. 14, 707-733 https://doi.org/10.1007/s10577-006-1086-x
- Bettinger, B.T., Gilbert, D.M., and Amber, D.C. (2004). Actin up in the nucleus. Mol. Cell. Biol. 5, 410-415
- Bolzer, A., Kreth, G., Solovei, I., Koehler, D., Saracoglu, K., Fauth, Ch., Muller, S., Eils, R., Cremer, Ch., Speicher, M.R., et al. (2005). Three-dimensional maps of all chromosomes in human male fibroblast nuclei and prometaphase rosettes. PLoS Biol. 3, e157 https://doi.org/10.1371/journal.pbio.0030157
- Boyle, S., Gilchrist, S., Bridger, J.M., Mahy, N.L., Ellis, J.A., and Bickmore, W.A. (2001). The spatial organization of human chromosomes within the nuclei of normal and emerin-mutant cells. Hum. Mol. Genet. 10, 211-219 https://doi.org/10.1093/hmg/10.3.211
- Caron, H., van Schaik, B., van der Mee, M., Baas, F., Riggins, G., van Sluis, P., Hermus, M.Ch., van Asperen, R., Boon, K., Voute, P.A., et al. (2001). The human transcriptome map: Clustering of highly expressed genes in chromosomal domains. Science 291, 1289-1292 https://doi.org/10.1126/science.1056794
- Cremer, T., and Cremer, C. (2001). Chromosome territories, nuclear architecture and gene regulation in mammalian cells. Nat. Rev. Genet. 2, 292-301 https://doi.org/10.1038/35066075
- Croft, J., Bridger, J., Perry, P., Boyle, S., Teague, P., and Bickmore, W. (1999). Differences in the localization and morphology of chromosomes in the human nucleus. J. Cell Biol. 145, 1119-1131 https://doi.org/10.1083/jcb.145.6.1119
- Dunham, A., Matthews, L.H., Burton, J., Ashurst, J.L., Howe, K.L., Ashcroft, K.J., Beare, D.M., Burford, D.C., Hunt, S.E., Griffiths- Jones, S., et al. (2004). The DNA sequence and analysis of human chromosome 13. Nature 428, 522-528 https://doi.org/10.1038/nature02379
- Goetze, S., Mateos-Langerak, J., Gierman, H.J., de Leeuw, W., Giromus, O., Indemans, M.H.G., Koster, J., Ondrej, V., Versteeg, R., and van Driel, R. (2007). The 3D structure of human interphase chromosome is related to the transcriptome map. Mol. Cell. Biol. 27, 4475-4487 https://doi.org/10.1128/MCB.00208-07
- Guelen, L., Pagie, L., Brasset, E., Meuleman, W., Faza, M.B., Talhout, W., Eussen, B.H., de Klein, A., Wessels, L., de Laat, W., et al. (2008). Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions. Nature 453, 948-951 https://doi.org/10.1038/nature06947
- Hofmann, W., Reichart, B., Ewald, A., Müller, E., Schmitt, I., Stauber, R.H., Lottspeich, F., Jockusch, B.M., Scheer, U., Hauber, J., et al. (2001). Cofactor requirements for nuclear export of Rev response element (RRE)- and constitutive transport element (CTE)-containing retroviral RNAs. An unexpected role for actin. J. Cell Biol. 152, 895-910 https://doi.org/10.1083/jcb.152.5.895
- Hofmann, W., Stojiljkovic, L., Fuchsova, B., Vargas, G.M., Mavrommatis, E., Philimonenko, V., Kysela, K., Goodrich, J.A., Lessard, J.L., Hope, T.J., et al. (2004). Actin is part of pre-initiation complexes and is necessary for transcription by RNA polymerase II. Nat. Cell. Biol. 6, 1094-1101 https://doi.org/10.1038/ncb1182
- Holaska, J.M., Wilson, K.L., and Mansharami, M. (2002). The nuclear envelope, lamins and nuclear assembly. Curr. Opin. Cell Biol. 14, 357-364 https://doi.org/10.1016/S0955-0674(02)00329-0
- Holaska, J.M., Kowalski, A.K., and Wilson, K.L. (2004). Emerin caps the pointed end of actin filaments: evidence for an actin cortical network at the nuclear inner membrane. PLoS Biol 2, e231 https://doi.org/10.1371/journal.pbio.0020231
- Kiseleva, E., Drummond, S.P., Goldberg, M.W., Rutheford, S.A., Allen, T.D., and Wilson, K.L., (2004). Actin- and protein-4.1- containing filaments link nuclear pore complexes to subnuclear organelles in Xenopus oocyte nuclei. J. Cell Sci. 117, 2481-2490 https://doi.org/10.1242/jcs.01098
- Kozubek, M., Kozubek, S., Lukašova, E., Bartova, E., Skalníkova, M., Matula, P., Matula, P., Jirsova, P., Cafourkova, A., and Koutna, I. (2001). Combined confocal and wide-field highresolution citometry of fluorescence in situ hybridization-stained cells. Cytometry 45, 1-12 https://doi.org/10.1002/1097-0320(20010901)45:1<1::AID-CYTO1138>3.0.CO;2-M
- Kozubek, S., Lukasova, E., Jirsova, P., Koutna, I., Kozubek, M., Gaňova, A., Bartova, E., Falk, M., and Pasekova, R. (2002). 3D structure of the human genome: order in randomness. Chromosoma 111, 321-331 https://doi.org/10.1007/s00412-002-0210-8
- Le Beyec, J., Xu, R., Lee, S.Y., Nelson, C.M., Ritzki, A., Alcaraz, J., and Bissell, M.J. (2007). Cell shape regulates global histone acetylation in human mammary epithelial cells. Exp. Cell Res. 313, 3066-3075 https://doi.org/10.1016/j.yexcr.2007.04.022
- Lee, K.K., Haraguchi, T., Lee, R.S., Koujin, T., Hiraoka, Y., and Wilson, K.L. (2001). Distinct functional domains in emerin bind lamin A and DNA-bridging protein BAF. J. Cell Sci. 114, 4567-4573
- Libotte, T., Zaim, H., Abraham, S., Padmakumar, V.C., Schneider, M., Lu, W., Munck, M., Hutchinson, Ch., Wehnert, M., Fahrenkrog, B., et al. (2005). Lamin A/C-dependent localization of nesprin-2, a giant scaffolder at the nuclear envelope. Mol. Biol. Cell 16, 3411-3424 https://doi.org/10.1091/mbc.E04-11-1009
- Lin, F., and Worman H.J. (1993). Structural organization of the human gene encoding nuclear lamin A and nuclear lamin C. J. Biol. Chem. 268, 16321-16326
-
McDonald, D., Carrero, G., Andrin, Ch., de Vries, G., and Hendzel, M.J., (2006). Nucleoplasmic
$\beta$ -actin exists in a dynamic equilibrium between low-mobility polymeric species and rapidly diffusing populations. J. Cell Biol. 172, 541-552 https://doi.org/10.1083/jcb.200507101 - Meaburn, K.J., Misteli, T., and Soutoglou, E. (2007). Spatial genome organization in the formation of chromosomal translocations. Sem. Cancer Biol. 17, 80-90 https://doi.org/10.1016/j.semcancer.2006.10.008
- Misteli, T. (2007). Beyond the sequence: cellular organization of genome function. Cell 128, 787-800 https://doi.org/10.1016/j.cell.2007.01.028
- Moir, R.D., Spann, T.P., Herrmann, H., and Goldman, R.D. (2000). Disruption of nuclear lamin organization blocks the elongation phase of DNA replication. J. Cell Biol. 149, 1179-1191 https://doi.org/10.1083/jcb.149.6.1179
- Segura-Totten, M., and Wilson, K.L. (2004). BAF: roles in chromatin, nuclear structure and retrovirus integration. Trends Cell Biol. 14, 261-266 https://doi.org/10.1016/j.tcb.2004.03.004
- Shumaker, D.K., Kuczmarski, E.R., and Goldman, R.D. (2003). The nucleoskeleton: lamins and actin are major players in essential nuclear functions. Curr. Opin. Cell Biol. 15, 358-366 https://doi.org/10.1016/S0955-0674(03)00050-4
- Vlcek S., and Foisner R. (2007). Lamins and lamin-associated proteins in aging and disease. Curr. Opin. Cell Biol. 19, 298-304 https://doi.org/10.1016/j.ceb.2007.04.001