Kosinostatin, a Major Secondary Metabolite Isolated from the Culture Filtrate of Streptomyces violaceusniger Strain HAL64

  • EI-Naggar, Moustafa Y. (Botany Department, Microbiology Division, Faculty of Science, Alexandria University)
  • Published : 2007.06.30

Abstract

During a screening program, an actinomycete strain isolated from the Egyptian soil was investigated for its potential to show antimicrobial activity. The identification of this isolate was performed according to spore morphology and cell wall chemo-type, which suggested that this strain is a streptomycete. Further cultural, physiological characteristics and the analysis of the nucleotide sequence of the 16S rRNA gene (1480 bp) of this isolate indicated that this strain is identical to Streptomyces violaceusniger (accession number EF063682) and then designated S. violaceusniger strain HAL64. In its culture supernatant, this organism could produce one major compound strongly inhibits the growth of Gram-positive but the inhibition of Gram-negative indicator bacteria was lower. The antibiotic was separated by silica gel column chromatography and then purified on a sephadex LH-20 column and finally the purity was checked by HPLC. The chemical structure of the purified compound was determined using spectroscopic analyses (molecular formula of $C_{33}H_{32}N_{2}O_{10}$ and molecular weight of 617.21) and found to be identical to the kosinostatin, a quinocycline antibiotic which is known to be produced by Micromonspora sp. TP-A0468 (Igarashi et al., 2002) and to quinocycline B isolated from Streptomyces aureofaciens (Celmer et al., 1958). Although the antibiotic is known, the newly isolated strain was able to produce the antibiotic as a major product providing an important biotechnological downstream advantage.

Keywords

References

  1. Becker, B., M.P. Lechevalier, and H.A. Lechevalier. 1965. Rapid differentiation between Nocardia and Streptomyces by paper chromatography of whole cell hydrolysates. Appl. Microbiol. 13, 236-243
  2. Berdy, J. 2005. Bioactive microbial metabolites. A personal view. J. Antibiot. 58, 1-26 https://doi.org/10.1038/ja.2005.1
  3. Bull, A.T., M. Goodfellow, and J.H. Slater. 1992. Biodiversity as a source of innovation in biotechnology. Annu. Rev. Microbiol. 42, 219-257
  4. Butler, M.J., E. Takano, P. Bruheim, S. Jovetic, F. Marinelli, and M.J. Bibb. 2003. Deletion of scbA enhances antibiotic production in Streptomyces lividans. Appl. Microbiol. Biotechnol. 61, 512-516 https://doi.org/10.1007/s00253-003-1277-8
  5. Cardenas, M.E., A. Sanfridson, N.S. Cutler, and J. Heitma. 1998. Signal-transduction cascades as targets for therapeutic intervention by natural products. Trends Biotechnol. 16, 427-433 https://doi.org/10.1016/S0167-7799(98)01239-6
  6. Celmer, W.D., K. Murai, K.V. Rao, F.W. Tanner, Jr., and W.S. Marsh. 1958. The quinocycline complex. I. Isolation and characterization. p. 484-492. In Antibiotic Annual 1957-1958, New York, Medical Encyclopedia, Inc., USA
  7. Chater, K.F. 1998. Taking a genetic scalpel to the Streptomyces colony. Microbiol. 114, 1465-1478
  8. Edwards, U., T. Rogall, H. Bocker, M. Emade, and E. Bottger. 1989. Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal DNA. Nucleic Acids Res. 17, 7843-7853 https://doi.org/10.1093/nar/17.19.7843
  9. El-Naggar, M.Y., M.A. Hassan, W.Y. Said, and S.A. El-Aassar. 2003. Effect of support materials on antibiotic MSW2000 production by immobilized Streptomyces violatus. J. Gen. Appl. Microbiol. 49, 235-243 https://doi.org/10.2323/jgam.49.235
  10. El-Naggar, M.Y., S.A. El-Aassar, and S.M. Abdul-Gawad. 2006. Meroparamycin production by newly isolated local Streptomyces sp. Strain MAR01: taxonomy, fermentation, purification and structural elucidation. J. Microbiol. 44, 432-438
  11. Hall, T.A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41, 95-98
  12. Hayashi, K., M. Hashimoto, N. Shigematsu, M. Nishikawa, M. Ezaki, M. Yamashita, S. Kiyoto, M. Okuhara, M. Kohsaka, and H. Imanaka. 1992. WS93226A, a novel tachykinin antagonist isolated from Streptomyces violacusniger No. 9326. J. Antibiot. 45, 1055-1063 https://doi.org/10.7164/antibiotics.45.1055
  13. Igarashi, Y., H. Higuchi, T. Oki, and T. Furumai. 2002. NMR analysis of quinocycline antibiotics: structure determination of kosinostatin, an antitumour substance from Micromonospora sp. TP-A0468. J. Antibiot. 55, 134-140 https://doi.org/10.7164/antibiotics.55.134
  14. Kojiri, K., S. Nakajima, A. Fuse, H. Suzuki, and H. Suda. 1995. BE- 4566B, a new antibiotic produced by Streptomyces violaceusniger. J. Antibiot. 48, 1506-1508 https://doi.org/10.7164/antibiotics.48.1506
  15. Kornerup, A. and J.H. Wanscher, eds. 1978. Methuen Handbook of colour. Methuen, London, UK
  16. Kremer, L., J.D. Douglas, A.R. Baulard, C. Morehouse, and M.R. Guy. 2000. Thiolactomycin and related analogues as novel anti-ycobacterial agents targeting KasA and KasB condensing enzymes in Mycobacterium tuberculosis. J. Biol. Chem. 275, 16857-16864 https://doi.org/10.1074/jbc.M000569200
  17. Laatsch, H. 2003. A natural products database for rapid structure determination, chemical concepts, Weinheim, Germany
  18. Lechevalier, H.A. 1975. Production of the same antibiotics by members of different genera of microorganisms. Adv. Appl. Microbiol. 19, 25-45 https://doi.org/10.1016/S0065-2164(08)70421-0
  19. Lechevalier, H.A., S.T. Williams, M.E. Sharpe, and J.G. Holt. 1989. The Actinomycetes: A practical guide to genetic identification of actinomycetes. In Bergy's Manual of Systematic Bacteriology. 9, 2344-3330
  20. Lechevalier, M.P. and H.A. Lechevalier. 1980. The chemotaxonmoy of actinomycetes. p. 227-291. In A. Dietz, and D.W. Thayer (eds.), Actinomycete Taxonomy. Special publication No. 6, SIM, Arlington, USA
  21. Okazaki, T. and Y. Okami. 1972. Studies on marine microorganisms. II. Actinomycetes in Sagami Bay and their antibiotic substances. J. Antibiot. 25, 461-466 https://doi.org/10.7164/antibiotics.25.461
  22. Page, R.D.M. 1996. TREEVIEW: An application to display phylogenetic trees on personal computers. Computer Applications in the Biosciences 12, 357-358
  23. Price, A.C., K.H. Choi, R.J. Health, Z. Li, S.W. White, and C.O. Rock. 2001. Inhibition of ${\beta}$-ketoacyl-[acyl carrier protein] synthases by thiolactomycin and cerulenin: structure and mechanism. J. Biol. Chem. 276, 6551-6559 https://doi.org/10.1074/jbc.M007101200
  24. Ubukata, M., N. Shiraishi, K. Kobinata, T. Takuji, I. Yamaguchi, and H. Osada. 1995. RS-22A, B and C: new macrolide antibiotics from Streptomyces violaceusniger. I. Taxonomy, fermentation, isolation and biological activities. J. Antibiot. 48, 289-292 https://doi.org/10.7164/antibiotics.48.289
  25. Sambrook, J., E.F. Fritsch, and T. Maniatis. 1989. Molecular Cloning. A Laboratory Manual. Cold Spring Harbor, Cold Spring Harbor Laboratory Press, New York, USA
  26. Sanger, F., S. Nicklen, and A.R. Coulson. 1977. DNA sequencing with chain terminator inhibitors. Proc. Natl. Acad. Sci. USA 74, 5463-5467
  27. Shirling, E.B. and D. Gottlieb. 1966. Methods for characterization of Streptomyces species. Int. J. Syst. Bacteriol. 16, 313-340 https://doi.org/10.1099/00207713-16-3-313
  28. Woese, C.R. 1998. Default taxonomy: Ernst Mayr's view of the microbial world. Proc. Natl. Acad. Sci. USA 95, 11043-11046
  29. Youshimura, S., T. Otsuka, Y. Tsurumi, Y. Muramatsu, H. Hatanaka, M. Okamoto, S. Hashimuto, and M. Okuhara. 1998. $WA8242A_{1},\;A_{2}$ and B, novel secretory phospholipase $A_{2}$ inhibitors produced by Streptomyces violaceusniger. I. Taxonomy, production and purification. J. Antibiot. 51, 1-7 https://doi.org/10.7164/antibiotics.51.1