Isolation and Characterization of a Novel Calcium/Calmodulin-Dependent Protein Kinase, AtCK, from Arabidopsis

  • Jeong, Jae Cheol (Division of Applied Life Science (BK21 program), Plant Molecular Biology and Biotechnology Research Center and Environmental Biotechnology National Core Research Center, Graduate School of Gyeongsang National University) ;
  • Shin, Dongjin (Division of Applied Life Science (BK21 program), Plant Molecular Biology and Biotechnology Research Center and Environmental Biotechnology National Core Research Center, Graduate School of Gyeongsang National University) ;
  • Lee, Jiyoung (Division of Applied Life Science (BK21 program), Plant Molecular Biology and Biotechnology Research Center and Environmental Biotechnology National Core Research Center, Graduate School of Gyeongsang National University) ;
  • Kang, Chang Ho (Division of Applied Life Science (BK21 program), Plant Molecular Biology and Biotechnology Research Center and Environmental Biotechnology National Core Research Center, Graduate School of Gyeongsang National University) ;
  • Baek, Dongwon (Division of Applied Life Science (BK21 program), Plant Molecular Biology and Biotechnology Research Center and Environmental Biotechnology National Core Research Center, Graduate School of Gyeongsang National University) ;
  • Cho, Moo Je (Division of Applied Life Science (BK21 program), Plant Molecular Biology and Biotechnology Research Center and Environmental Biotechnology National Core Research Center, Graduate School of Gyeongsang National University) ;
  • Kim, Min Chul (Division of Applied Life Science (BK21 program), Plant Molecular Biology and Biotechnology Research Center and Environmental Biotechnology National Core Research Center, Graduate School of Gyeongsang National University) ;
  • Yun, Dae-Jin (Division of Applied Life Science (BK21 program), Plant Molecular Biology and Biotechnology Research Center and Environmental Biotechnology National Core Research Center, Graduate School of Gyeongsang National University)
  • Received : 2007.04.26
  • Accepted : 2007.06.18
  • Published : 2007.10.31

Abstract

Protein phosphorylation is one of the major mechanisms by which eukaryotic cells transduce extracellular signals into intracellular responses. Calcium/calmodulin ($Ca^{2+}/CaM$)-dependent protein phosphorylation has been implicated in various cellular processes, yet little is known about $Ca^{2+}/CaM$-dependent protein kinases (CaMKs) in plants. From an Arabidopsis expression library screen using a horseradish peroxidase-conjugated soybean calmodulin isoform (SCaM-1) as a probe, we isolated a full-length cDNA clone that encodes AtCK (Arabidopsis thaliana calcium/calmodulin-dependent protein kinase). The predicted structure of AtCK contains a serine/threonine protein kinase catalytic domain followed by a putative calmodulin-binding domain and a putative $Ca^{2+}$-binding domain. Recombinant AtCK was expressed in E. coli and bound to calmodulin in a $Ca^{2+}$-dependent manner. The ability of CaM to bind to AtCK was confirmed by gel mobility shift and competition assays. AtCK exhibited its highest levels of autophosphorylation in the presence of 3 mM $Mn^{2+}$. The phosphorylation of myelin basic protein (MBP) by AtCK was enhanced when AtCK was under the control of calcium-bound CaM, as previously observed for other $Ca^{2+}/CaM$-dependent protein kinases. In contrast to maize and tobacco CCaMKs (calcium and $Ca^{2+}/CaM$-dependent protein kinase), increasing the concentration of calmodulin to more than $3{\mu}M$ suppressed the phosphorylation activity of AtCK. Taken together our results indicate that AtCK is a novel Arabidopsis $Ca^{2+}/CaM$-dependent protein kinase which is presumably involved in CaM-mediated signaling.

Keywords

Acknowledgement

Supported by : Rural Development Administration, KOSEF, Korea Science & Engineering Foundation

References

  1. Bootman, M. D. and Berridge, M. J. (1995) The elemental principles of calcium signaling. Cell 83, 675−678
  2. Braun, A. P. and Schulman, H. (1995) The multifunctional calcium/calmodulin-dependent protein kinases: from form to function. Annu. Rev. Physiol. 57, 417−445
  3. Cheng, S. H., Willmann, M. R., Chen, H. C., and Sheen, J. (2002) Calcium signaling through protein kinases. The Arabidopsis calcium-dependent protein kinase gene family. Plant Physiol. 129, 469−485
  4. Chin, D. and Means, A. R. (2000) Calmodulin; a prototypical calcium sensor. Trend. Cell Biol. 10, 322−328
  5. Erickson-Viitanen, S. and DeGrado, W. F. (1987) Recognition and characterization of calmodulin-binding sequences in peptides and proteins. Meth. Enzymol. 139, 455−478
  6. Harmon, A. C., Gribskov, M., and Harper, J. F. (2000) CDPKs - a kinase for every $Ca^{2+}$ signal? Trends Plant Sci. 5, 154−159
  7. Hrabak, E. M., Chan, C. W., Gribskov, M., Harper, J. F., Halford, N., et al. (2003) The Arabidopsis CDPK-SnRK superfamily of protein kinases. Plant Physiol. 132, 666−680
  8. Hook, S. S. and Means, A. R. (2001) $Ca^{2+}$/CaM-dependent kinases: from activation to function. Annu. Rev. Pharmacol. Toxicol. 41, 471−505
  9. James, P., Vorherr, T., and Caratoli, E. (1995) Calmodulinbinding domain: Just two faced or multi-faceted? Trends Biochem. Sci. 20, 38−42
  10. Kao, Y. L., Deavours, B. E., Phelps, K. K., Walker, R. A., and Reddy, A. S. (2000) Bundling of microtubules by motor and tail domains of a kinesin-like calmodulin-binding protein from Arabidopsis: regulation by $Ca^{2+}$/calmodulin. Biochem. Biophys. Res. Commun. 267, 201−207
  11. Kim, M. C., Lee, S. H., Kim, J. K., Chun, H. J., Choi, M. S., et al. (2002) Mlo, a modulator of plant defense and cell death, is a novel calmodulin-binding protein. J. Biol. Chem. 277, 19304−19314
  12. Lee, S. H., Kim, M. C., Heo, W. D., Kim, J. C., Chung, W. S., et al. (1999) Competitive binding of calmodulin isoform to calmodulin-binding proteins: implication for the function of calmodulin isoforms in plants. Biochem. Biophys. Acta 1433, 56−67
  13. Levy, J., Bres, C., Geurts, R., Chalhoub, B., Kulikova, O., et al. (2004) A putative $Ca^{2+}$ and calmodulin-dependent protein kinase required for bacterial and fungal symbioses. Science 303, 1361−1364
  14. Liu, Z., Xia, M., and Poovaiah, B. W. (1998) Chimeric calcium/ calmodulin-dependent protein kinase in tobacco: differential regulation by calmodulin isoforms. Plant Mol. Biol. 38, 889−897
  15. Nairn, A. C. and Picciotto, M. R. (1994) Calcium/CaM-dependent protein kinase. Semin. Cancer Biol. 5, 295−303
  16. Pandey, S. and Sopory, S. K. (1998) Biochemical evidence for a calmodulin-stimulated calcium-dependent protein kinase in maize. Eur. J. Biochem. 225, 718−726
  17. Pandey, S. and Sopory, S. K. (2001) Zea mays CCaMK: autophosphorylation- dependent substrate phosphorylation and downregulation by red light. J. Exp. Bot. 52, 691−700
  18. Pandey, S., Tiwari, S. B., Upadhyaya, K. C., and Sopory, S. K. (2000) Calcium signalling: linking environmental signals to cellularfunctions. Crit. Rev. Plant Sci. 19, 291−318
  19. Park, C. Y., Heo, W. D., Yoo, J. H., Lee, J. H., Kim, M. C., et al. (2004) Pathogenesis-related gene expression by specific calmodulin isoforms is dependent on NIM1, a key regulator of system acquired resistance. Mol. Cells 18, 207−213
  20. Patil, S. K., Takezawa, D., and Poovaiah, B. W. (1995) Chimeric plant calcium/CaM dependent protein kinase gene with a neural visinin like calcium binding domain. Proc. Natl Acad. Sci. USA 92, 4897−4901
  21. Poovaiah, B. W. and Reddy, A. S. (1993) Calcium and signal transduction in plants. Crit. Rev. Plant. Sci. 12, 185−211
  22. Reddy, V. S., Ali, G. S., and Reddy, A. S. (2002) Genes encoding calmodulin-binding proteins in the Arabidopsis genome. J. Biol. Chem. 277, 9840−9852
  23. Reddy, V. S. and Reddy A. S. (2004) Proteomics of calciumsignaling components in plants. Phytochemistry 12, 1745−1776
  24. Rhoads, A. R. and Friedberg, F. (1997) Sequence motifs for calmodulin recognition. FASEB J. 11, 331−340
  25. Sathyanarayanan, P. V. and Poovaiah, B. W. (2002) Autophosphorylation- dependent inactivation of plant chimeric calcium/ calmodulin-dependent protein kinase. Eur. J. Biochem. 269, 2457−2463
  26. Sathyanarayanan, P. V. and Poovaiah, B. W. (2004) Decoding $Ca^{2+}$ signals in plants. Crit. Rev. Plant Sci. 23, 1−11
  27. Sathyanarayanan, P. V., Cremo, C. R., and Poovaiah, B. W. (2000) Plant chimeric $Ca^{2+}$/calmodulin-dependent protein kinase. Role of the neural visinin-like domain in regulating autophosphorylation and calmodulin affinity. J. Biol. Chem. 275, 30417−30422
  28. Stone, J. M. and Walker, J. C. (1995) Plant protein kinase families and signal transduction. Plant Physiol. 108, 451−457
  29. Sugita, R., Mochizuki, S., Tadashi, H. O., Yokokura, H., Kobayashi, R., et al. (1994) $Ca^{2+}$/CaM-dependent protein kinase kinase cascade. Biochem. Biophys. Res. Commun. 203, 694−701
  30. Tirichine, L., Imaizumi-Anraku, H., Yoshida, S., Murakami, Y., Madsen, L. H., et al. (2006) Deregulation of a $Ca^{2+}$/calmodulin- dependent kinase leads to spontaneous nodule development. Nature 441, 1153−1156
  31. Takezawa, D., Ramachandiran, S., Paranjape, V., and Poovaiah, B. W. (1996) Dual regulation of a chimeric plant serine/ threonine kinase by calcium and calcium/calmodulin. J. Biol. Chem. 271, 8126−8132
  32. Trewavas, A. J. and Malho, R. (1997) Signal perception and transduction: the origin of the phenotype. Plant Cell 9, 1181−1195
  33. Trewavas, A. J. and Malho, R. (1998) Calcium signaling in plant cell; the big network. Curr. Opion. Plant Biol. 1, 428−433
  34. Watillon, B., Kettmann, R., Boxus, P., and Burny, A. (1993) A calcium/calmodulin-binding serine/threonine protein kinase homologous to the mammalian type II calcium/calmodulindependent protein kinase is expressed in plant cells. Plant Physiol. 101, 1381−1384
  35. Wu, Y., Hiratsuka, K., Neuhaus, G., and Chua, N. H. (1996) Calcium and cGMP target distinct phytochrome-responsive elements. Plant J. 10, 1149−1154
  36. Wu, Y., Kuzma, J., Marechal, E., Graeff, R., Lee, H. C., et al. (1997) Abscisic acid signalling through cyclic ADP-ribose in plants. Science 278, 2126−2130
  37. Yang, T., Chaudhuri, S., Yang, L., Chen, Y., and Poovaiah, B. W. (2004) Calcium/calmodulin up-regulates a cytoplasmic receptorlike kinase in plants. J. Biol. Chem. 279, 42552−42559
  38. Yoo, J. H., Park, C. Y., Kim, J. C., Heo, W. D., Cheong, M. S., et al. (2005) Direct interaction of a divergent CaM isoform and the transcription factor, MYB2, enhances salt tolerance in Arabidopsis. J. Biol.Chem. 280, 3697−3706
  39. Zhang, L., Liu, B. F., Liang, S. P., Jones, R. L., and Lu, Y-T. (2002) Molecular and biochemical characterization of a calcium/ calmodulin-binding protein kinase from rice. Biochem. J. 368, 145−157