Journal of Food Hygiene and Safety (한국식품위생안전성학회지)

The Korean Society of Food Hygiene and Safety (한국식품위생안전성학회)
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Primers for typing Listeria spp. using Random Amplified Polymorphic DNA (RAPD) ANalysis

Listeria spp.의 RAPD typing을 위한 Primer의 분리력 비교

  • Published : 2003.06.01
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Abstract

Random amplified Polymorphic DNA (RAPD) analysis Is based on the amplification of random DNA segment using a single arbitrary primer. Polymorphic DNA patterns identified by this method can be used for typing Listeria monocytogenes. To select the primers for RAPD typing Listeria spp., the performance of 31 primers were compared by analyzing 13 Listeria spp. reference strains. Reproducible electrophoresis patterns were obtained. Among 31 primers, 6 primers (primer 6, HLWL74, UBC155, UBC127, Lis5, Lis11) showed better differentiation, when discrimination index, band clarity, band number, difficulty of band scoring were considered than the others. These primers will be useful far typing Listeria spp. in the future. Currently, we are under investigation for the RAPD typing of contaminated L. monocytogenes for the risk analysis of pork processing plant using these primers.

RAPD 분석은 한 개의 primer를 이용하여 임의의 DNA 조각을 증폭하는 것이다. 이때 만들어지는 여러 형태의 DNA pattern을 이용하여 리스테리아 모노사이토제네스를 분류할 수 있다. 리스테리아균들을 효과적으로 RAPD typing 할 수 있는 primer들을 엄선하기 위하여 리스테리아 표준균주 13종을 대상으로 총 31가지 primer들의 RAPD 분리력을 비교하여 보았다. 결과는 재현성이 높았으며 이중 6가지 primer(primer 6, HLWL74, UBC155, UBC127, Lis5, Lis11)가 discrimination index, band의 숫자, band scoring의 난이도 등을 고려해 볼 때 나머지 primer 들에 비해 우수한 분리력을 보였다. 이들 primer들은 장차 리스테리아의 RAPD typing에 이용될 수 있을 것으로 보이며, 현재는 이들을 이용하여 돈육공장의 오염원 규명을 위한 연구를 수행 중이다.

Keywords

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