Isolation of a Medium Chain Length Polyhydroxyalkanoic Acids Degrading Bacterium, Janthinobacterium lividum

  • Park, Jin-Seo (Department of Microbiology, College of Sciences, Institute of Traditional Medicine and Bioscience, Daejeon University) ;
  • Park, Jeong-Youl (Department of Microbiology, College of Sciences, Institute of Traditional Medicine and Bioscience, Daejeon University) ;
  • Joung, Pil-Mun (Department of Microbiology, College of Sciences, Institute of Traditional Medicine and Bioscience, Daejeon University) ;
  • Park, Seong-Joo (Department of Microbiology, College of Sciences, Institute of Traditional Medicine and Bioscience, Daejeon University) ;
  • Rhee, Young-Ha (Department of Microbiology, Chungnam National University) ;
  • Shin, Kwang-Soo (Department of Microbiology, College of Sciences, Institute of Traditional Medicine and Bioscience, Daejeon University)
  • Published : 2001.06.01

Abstract

Medium-chain length polyhydrexyalkanoic acids (MCL-PHAs) degrading bacterium was isolated from the soil. The bacterium was identified as Janthinobacterium lividum by its biochemical properties, cell membrane fatty acids composition, and 16S rDNA sequence analysis. The bacterium showed a similarity of 0.911 with J. lividum according to the cell membrane fatty acids analysis and a similarity of 97% in the 16S rDNA requence analysis. Culture supernatant of the bacterium skewed the highest depolymerase activity toward polyhydroxynonanoic acid (PHN) that did not degrade the poly-$\beta$-hydroxybutyric acid (PHB). The esterase activity was also detected with p-nitrophenyl (PNP) esters of fatty acids such as PNP-dodecanoic PNP-dodecanoic acid, PNP-decanoic acid, and PNP-hexanoic acid.

Keywords

References

  1. Microbiol. Rev. v.54 Occurrence, Metabolism, Metabolic role, and industrial use of bacterial polyhydroxyalkanoates Anderson, A.J.;E.A. Dawes
  2. Appl. Environ. Microbiol. v.58 Methanogenic degradation of poly (3-hydroxyalkanoates) Budwill, K.P.;M. Fedorak;W. J. Page
  3. Biodegradation v.6 The biodegradation of poly-3-hydroxyalkanoates, PHAs, with long alkyl substituents by Pseudomonas maculicola Foster, L.J.R.;S.J. Zervas;R.W. Lenz;R.C. Fuller
  4. Nature v.182 Occurrence of poly-b-hydroxybutyric acid in aerobic gram-negative bacteria Forsyth, W.G.C.;A.C. Hayward;R.B. Roberts
  5. J. Environ. Polym. Degrad. v.1 Degradation of poly (3-hydroxybutyrate), PHB, by bacteria and purificaiton of a novel PHB depolymerase of Comamonas sp. Jendrossek,D.;I. Knoke;R.H. Habibian;A. Steinbuchel;H.G. Schlegel
  6. J. Microbiol. Biotechnol. v.8 Isolation of an aromatic polyhydroxyalkanoate-degrading bacteirum Ju, H.S.;J. Kim;H. Kim
  7. Appl. Microbiol. Biotechnol. v.53 Characterization of an extracellular poly (3-hydroxy-5-phenylvalerate) depolymerase from Xanthomonas sp. JS02 Kim, H.;H.S. Ju;J. Kim
  8. J. Biosci. Bioeng. v.89 Purification and characterization of extracellular medium-chain length polyhydroxyalkanoate depolymerase from Pseudomonas sp. RY1 Kim, H.M.;K.E. Ryu;K.S. Bae;Y.H. Rhee
  9. Microbiol. Mol. Biol. Rev. v.63 Metabolic engineering of poly(3-hydroxyvaleric acid): from DNA to plastic Madison, L.l.;G.W. Huisman
  10. Appl. Microbiol. Biotechnol. v.38 Purification and properties of poly (3-hydroxyvaleric acid) depolymerase from Pseudomonas lemoignei Muller, B.;D. Jendrossek
  11. Appl. Environ. Microbiol. v.59 Degradation of poly (3-hydroxyoctanoic acid) [P(3OH)] by bacteria: purification and properties of a P(3OH) depolymerase from Pseudomonas fluorescens GK13 Schirmer, A.;D. Jendrossek;H.G. Schlegel
  12. J. Bacteriol. v.176 Molecular characterization of the extracellular poly (3-hydroxyotanoic acid) [P(3OH)] depolymerase gene of Pseudomonas fluorescens GK13 and of its gene product Schirmer, A.;D. Jendrossek