Random Amplified Polymorphic DNA-PCR Analysis for Identification of Bacillus anthracis

탄저균의 Random Amplified Polymorphic DNA-PCR 분석

  • 김성주 (한양대학교 생화학 및 분자생물학과) ;
  • 박경현 (한양대학교 생화학 및 분자생물학과) ;
  • 김형태 (한양대학교 생화학 및 분자생물학과) ;
  • 조기승 (한양대학교 생화학 및 분자생물학과) ;
  • 김기천 (한양대학교 생화학 및 분자생물학과) ;
  • 최영길 (한양대학교 생물학과) ;
  • 박승환 (생명공학연구원) ;
  • 이남택 (육군사관학교 화학과) ;
  • 채영규 (한양대학교 생화학 및 분자생물학과)
  • Published : 2001.03.01

Abstract

Molecular typing of Bacillus anthracis has been extremely difficult due to the lack of polymorphic DNA markers. Aiming to develop a DNA marker specific for Bacillus anthracis and to be able to discriminate this species from Bacillus genus, we applied the random amplified polymorphic DNA (RAPD)-PCR. We have identified B. anthracis from various Bacillus species. The analysis performed by RAPD clearly demonstrated substantial genetic variations among Bacillus species. This type of analysis is an easy, quick and highly discriminatory technique that may help in diagnosis of anthrax.

탄저균의 분자적 다양성 분석은 다양한 DNA표지의 부족으로 쉬운 일이 아니어서, 본 연구에서는 random amplified polymorphic DNA (RAPD)-PCR을 이용하여 Bacillus 속으로부터 탄저균을 구별할 수 있는 새로운 DNA 표지를 개발하고자 하였다. RAPD-PCR을 이용한 분석은 다양한 Bacillus 종으로부터 탄저균을 동정할 수 있었으며, 아울러 Bacillus 종 사이에서 확실한 유전적인 변이를 확인할 수 있었다. 이러한 분석은 간단, 신속하고, 그리고 정확하게 탄저균을 진단하는데 활용할 수 있다고 본다.

Keywords

References

  1. 국립보건원보 v.31 탄저균의 세균학적 성상 및 역학적 특성에 관한 연구 김호훈;신영학;강연호;유천권;박미선;김동진
  2. 대한미생물학회지 v.31 생화학 및 혈청학적인 기술에 의한 한국에서 분리된 탄저균의 특성 조성근;박정문;최영길;채영규
  3. 대한미생물학회지 v.31 탄저균 galactose-N-acetylglucosamine 다당류에 대한 단일클론 항체의 생성 및 특성 조성근;박정문;권준헌;최영길;채영규
  4. 대한미생물학회지 v.27 배지표면 및 하면의 거대집락형태에 의한 탄저균 약독백신 주 Pasteur No. 2-Army 및 Stern 34-F2의 기타 유사 Bacillus species로부터의 감별 최철순;이경화;정상인;양용태
  5. 대한미생물학회지 v.27 탄저균의 협막형 및 비협막형 균주의 전균체항원에 대한 면역혈청을 이용한 Ouchterlony 면역확산시험에 의한 탄저균 및 유사탄저균의 균종동정과 균주감별 최철순;박정훈;정상인;양용태
  6. 대한미생물학회지 v.29 단클론 항체를 이용한 탄저균(Bacillus anthracis)의 동정 최철순;장호근;강석;김기정;정상인;양용태;박정문;권준헌
  7. J. Bacteriol. v.178 Identification of a region of genetic variability among Bacillus anthracis strains and related species Andersen, G.L.;J.M. Simchock;K.H. Wilson
  8. FEMS Microbiol. Lett. v.73 Comparative analysis of 23S ribosomal RNA gene sequence of Bacillus anthracis and emetic Bacillus cereus determined by PCR-direct sequencing Ash, C.;M.D. Collins
  9. Gene v.81 Nucleotide sequence and analysis of the lethal factor gene (lef) from Bacillus anthracis Bragg, T.S.;D.L. Robertson
  10. Appl. Environ. Microviol. v.65 A randomly amplified polymorphic DNA marker specific for the Bacillus cereus group is diagnostic for Bacillus anthracis Daffonchio, D.;S. Borin;G. Frova;R. Gallo;E. Mori;R. Fani;C. Sorlini
  11. Clin. Microbiol. Rev. v.6 Bacillus and related species Drobniewski, F.A.
  12. U.S. Department of Agricultural Handbook no.427 The genus Bacillus Gordon, R.E.;W.C. Haynes;C.H.N. Pang
  13. Eur. J. Clin. Microbiol. v.3 Enzyme linked lectinosorbent assay (ELISA) for detecting Bacillus anthracis Graham, K.;K. Keller;J. W.Jr. Ezzell;R. Doyl
  14. DNA Cloning v.Ⅱ Gene cloning in Streptomyces Hunter, I.A.;Glover D.M.(ed.)
  15. Appl. Environ. Microbiol. v.63 Characterization of the variable-number tandem repeats in vrrA from different Bacillus anthracis isolates Jackson, P.J.;E.A. Walthers;A.S. Kalif
  16. J. Bacteriol. v.179 Molecular evolution and diversity in Bacillus anthracis detected by amplified fragment length polymorphism markers Keim, P.;A. Kalif;J. Schupp
  17. J. Appl. Microbiol. v.87 Molecular diversity in Bacillus anthracis Keim, P.;A.M. Klevytska;L.B. Price;J.M. Schupp;G. Zinser;K.L. Smith;M.E. Huge-Jones;R. OKinaka;K.K. Hill;P.J. Jackson
  18. Biochemistry v.29 Characterization of ATP and calmodulin-binding properties of a truncated form of Bacillus anthracis adenylate cyclase Labruyere, E.;M. Mock;D. Ladant;S. Michelson;A.M. Gilles;B. Laoide;O. Barzu
  19. Int. J. Syst. Bacteriol v.48 Bacillus weihenstephanensis sp. nov. is a new psychrotolerant species of the Bacillus cereus group Lechner, S.;R. Mayr;K.P. Francis;B.M. Pruss;T. Kaplan;E. Wiessner-Gunkel;G.S. Stewart;S. Scherer
  20. Infect Immun v.52 Comparative efficacy of Bacillus anthracis live spore vaccine and protective antigen vaccine against anthrax in the guinea pig Little, S.F.;G.B. Knudson
  21. A Colour Atlas of Bacillus Species Differential tests for distinguishing B. anthracis from B. cereus (and B. thuringiensis) Parry, J.M.;P.C.B. Turnbull;J.R. Gibson;Carruthers GB(ed.)
  22. FEMS Immunol. Med. Microbiol v.15 Isolation of a specific chromosomic DNA sequence of Bacillus anthracis and its possible use in diagnosis Patra, G.;P. Sylvestre;V. Ramisse;J. Therasse;J.L. Guesdon
  23. J. Appl. Bacteriol. v.66 Identification of Bacillus anthracis by polyclonal antibodies against extracted vegetative cell antigens Phillips, R.W.;J.W. Jr. Ezzell
  24. J. Appl. Bacteriol v.64 Investigation of spore surface antigens in the genus Bacillus by the use of polyclonal antibodies in immunofluorescent tests Pillips, A.P.;K.L. Martin
  25. Phytopathology v.83 Genetic characterization of Fusarium graminearum strains using RAPD and PCR amplification Quellet, T.;K.A. Seifert
  26. J. Appl. Microbiol. v.87 Mesoscale ecology of anthrax in southern Africa: a pilot study of diversity and clustering Smith, K.L.;V. de Vos;H.B. Bryden;M.E. Huge-Joinds;A. Klevytska;L.B. Price;P.Keim;D.T. Scholl
  27. Guidelines for the surveillance and control of anthrax in Human and Animals(3rd Ed.) Turnbull, P.C.;R. Bohm;O. Cosivi;M. Doganay;M.E. Hugh-Jones;D.D. Joshi;M.K. Lalitha;V. de Vos
  28. Virology and Immunity(8th ed.) Anthrax. In: Principles of Bacteriology Turnbull, P.C.B.
  29. J. Bacteriol v.175 Cloning and characterization of a gene whose product is a trans-activator of anthrax toxin synthesis Uchida, I.;J.M. Hornung;C.B. Thorne;K.R. Klimpel;S.H. Leppla
  30. Nucleic Acids Res. v.23 AFLP: a new technique for DNA fingerprinting Vos, P.;R. Hogers;M. Bleeker;M. Reijans;M. Vander;T. Lee;M. Hornes;A. Frijters;J. Pot;M. Kuiper;M. Zabeau
  31. Methods Enzymol v.218 Genetic analysis using random amplified polymorphic DNA markers Williams, J.G.;M.K. Hanafey;J.A. Rafalski;S.V. Tingey
  32. J. Biol. Chem. v.265 A-type ATP binding consensus sequences are critical for the catalytic activity of the calmodulinsensitive adenyl cyclase from Bacillus anthracis Xia, Z.G.;D.R. Storm