Identification of Hemimethylcted DNA Binding Activity in the seqA Mutant

  • Lee, Ho (Institute for Molecular Biology and Genetics, Department of Microbiology, Seoul National University) ;
  • Kang, Suk-Hyun (Institute for Molecular Biology and Genetics, Interdisciplinary Program of Genetic Engineering, Seoul National University) ;
  • Yim, Jeong-Bin (Institute for Molecular Biology and Genetics, Department of Microbiology, Seoul National University) ;
  • Hwang, Deog-Su (Institute for Molecular Biology and Genetics, Interdisciplinary Program of Genetic Engineering, Seoul National University)
  • Published : 1998.09.01

Abstract

A 245 bp segment of E. coli chromosomal replication origin, oriC, contains 11 repeats of the GATC sequence in which adenine is methylated by Dam methylase. Newly replicated oriC is hemimethylated. The parental strand of the newly replicated oriC is methylated, but the nascent strand is not yet methylated until methylated by Dam methylase. The hemimethylated oriC plays an important role in the regulation of chromosomal replication. Activity in the seqA mutant was identified to bind preferentially to hemimethylated DNA, but not to fully-methylated DNA. This activity may participate in the sequestration of initiation of chromosomal replication.

Keywords

References

  1. Cell v.62 The role of dam methyltransferase in the control of DNA replication in E. coil. Boye E;Lobner-Olesen A
  2. Anal Biochem v.72 A rapid sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding Bradford MM
  3. Cell v.62 E. coil oriC and the dnaA gene promotor are sequestered from dam methyltransferase following the passage of the chromosomal replication fork Campbell JL;Kleckner N
  4. J Biol Chem v.254 Recognition sequence of the dam methylase of Escherichia coil K12 and mode of cleavage of Dpnl endonuclease Geier GE;Modrich P
  5. Cell v.30 Binding of the origin of replication of Escherichia coil to the outer membrane Hendrickson WG;Kusano T;Yamaki H;Balakrishnan R;King M;Murchie J;Schaechter M
  6. EMBO J v.13 Parental strand recognition of the DNA replication origin by the outer membrane in Escherichia coil Herrk J;Kern R;Guhal S;Landoulsi A;Fayet O;Malki A;Kohiyama M
  7. J Biochem Mol Biol v.28 Condensation of DNA by a histone-like protein in Escherichia coil Kim S;Hwang DS
  8. Cell v.63 The E. coil cell surface specifically prevents the initiation of DNA replication at oriC on hemimethylated DNA templates Landoulsi A;Malki A;Kern R;Kohiyama M;Hughes P
  9. J Biol Chem v.272 Occlusion of RNA polymerase by oligomerization of DnaA protein over the dnaA promoter of Escherichia coil Lee YS;Hwang DS
  10. Cell v.77 SeqA: a negative modulator of replication intiation in E. coil Lu M;Campbell JL;Boye E;Nancy K
  11. Proc Natl Acad Sci USA v.74 A DNA fragment containing the origin of replication of the Escherichia coil chromosome Marsh RC;Worcel A
  12. Mol & Gen Genet v.160 Origin of replication , oriC of the Escherichia coil chromosome on specialized transducing phages λ asn von Meyenburg K;Hansen FG;Nielsen LD;Riise E
  13. Cell v.54 The replicative origin of the E. coil chromosome binds to cell membrane only when hemimethylated Ogden GB;Pratt MJ;Schaechter M
  14. Mol & Gen Genet v.178 Replication origin of the Escherichia coil chromosome: the size and structure of the minimum DNA segment carrying the information for autonomous replication Oka A;Sugimoto S; Takanami M
  15. Molecular Cloning: a Laboratory Manual(2nd Ed.) Sambrook J;Fritsch EF;Maniatis T
  16. Cell v.82 E. coil SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication intiation and origin sequestration Slater S;Wolo S;Lu M;Boye E;Skarstad K;Kleckner N