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Complete genome sequence of Gordonia sp. MMS17-SY073, a soil actinobacterium

토양 방선균인 Gordonia sp. MMS17-SY073 균주의 유전체 분석

  • Kim, Yeong Seok (Department of Microbiology and Molecular Biology, College of Bioscience and Biotechnology, Chungnam National University) ;
  • Kim, Seung Bum (Department of Microbiology and Molecular Biology, College of Bioscience and Biotechnology, Chungnam National University)
  • 김영석 (충남대학교 생명시스템과학대학 미생물.분자생명과학과) ;
  • 김승범 (충남대학교 생명시스템과학대학 미생물.분자생명과학과)
  • Received : 2019.08.14
  • Accepted : 2019.09.11
  • Published : 2019.09.30

Abstract

An actinobacterial strain designated Gordonia sp. MMS17-SY073 (=KCTC 49257) was isolated from a coastal soil of an island, and its complete genome was analyzed. A single contig consisting of 5,962,176 bp with the G + C content of 67.4% was obtained, and the annotation resulted in 5,201 protein-coding genes, 6 rRNA genes and 45 tRNA genes. Strain MMS17-SY073 was closest to the type strain of Gordonia soli based on the 16S rRNA gene sequence comparison, sharing 98.5% sequence similarity. A number of biosynthetic gene clusters for secondary metabolites, non-ribosomal peptide synthetase types in particular, could be identified from the genome.

Keywords

Gordonia;biosynthetic gene cluster;complete genome;soil actinobacterium

Acknowledgement

Supported by : Chungnam National University

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