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Complete genome sequencing of Pseudomonas parafulva PpaJBCS1880, a biocontrol and plant growth promoting agent

식물 병 방제 및 생육촉진 효과를 나타내는 Pseudomonas parafulva PpaJBCS1880균주의 유전체 염기서열

  • Dutta, Swarnalee (Division of Biotechnology, Chonbuk National University) ;
  • Wabyona, Alex (Division of Biotechnology, Chonbuk National University) ;
  • Kakembo, David (Division of Biotechnology, Chonbuk National University) ;
  • Lee, Yong Hoon (Division of Biotechnology, Chonbuk National University)
  • Received : 2019.06.27
  • Accepted : 2019.08.28
  • Published : 2019.09.30

Abstract

Pseudomonas parafulva PpaJBCS1880 (PpaJBCS1880) isolated from rice seeds showed strong antagonistic activity against bacterial plant pathogens by producing lipopeptide. Furthermore, the strain controlled the incidence of bacterial pustule in soybean plants and promoted the growth of rice plants. Here we present complete genome sequence of PpaJBCS1880. The genome comprises of 5,208,480 bp with GC content of 63.4%, which includes 4,487 predicted protein-coding genes, 19 rRNAs, and 74 tRNAs. Genome analysis revealed genes encoding antimicrobial secondary metabolites such as lipopeptide, pyoverdine, phenazine, and hydrogen cyanide, which are known to play essential roles in biocontrol of plant diseases.

Keywords

antagonism;biocontrol;lipopeptide;PGPR

Acknowledgement

Supported by : Rural Development Administration, National Research Foundation of Korea (NRF)

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