DOI QR코드

DOI QR Code

Complete genome sequence of Cutibacterium acnes KCOM 1861 isolated from a human jaw osteomyelitis lesion

사람 악골 골수염에서 분리된 Cutibacterium acnes KCOM 1861의 유전체 염기서열 해독

  • Park, Soon-Nang (Korean Collection for Oral Microbiology and Department of Oral Biochemistry, School of Dentistry, Chosun University) ;
  • Roh, Hanseong (Macrogen Inc.) ;
  • Lim, Yun Kyong (Korean Collection for Oral Microbiology and Department of Oral Biochemistry, School of Dentistry, Chosun University) ;
  • Kook, Joong-Ki (Korean Collection for Oral Microbiology and Department of Oral Biochemistry, School of Dentistry, Chosun University)
  • 박순낭 (조선대학교 치과대학 구강생화학교실 및 한국구강미생물자원은행) ;
  • 노한성 (마크로젠) ;
  • 임윤경 (조선대학교 치과대학 구강생화학교실 및 한국구강미생물자원은행) ;
  • 국중기 (조선대학교 치과대학 구강생화학교실 및 한국구강미생물자원은행)
  • Received : 2017.04.10
  • Accepted : 2017.04.11
  • Published : 2017.06.30

Abstract

Cutibacterium acnes (formerly Propionibacterium acnes) is an anaerobic, Gram-positive rod and that is a normal flora of human skin and mucosal surface as well as an opportunistic pathogen related to acnes vulgaris, sarcoidosis, brain abscess, endocarditis, periodontitis, and endodontic infections. C. acnes KCOM 1861 (= ChDC B594) was isolated from a human jaw osteomyelitis lesion. Here, we present the complete genome sequence of C. acnes KCOM 1861.

Keywords

Cutibacterium acnes;human;jaw osteomyelitis

Acknowledgement

Supported by : National Research Foundation (NRF)

References

  1. Aubin, G.G., Baud'huin, M., Lavigne, J.P., Brion, R., Gouin, F., Lepelletier, D., Jacqueline, C., Heymann, D., Asehnoune, K., and Corvec, S. 2017. Interaction of Cutibacterium (formerly Propionibacterium) acnes with bone cells: a step toward understanding bone and joint infection development. Sci. Rep. 7, 42918. https://doi.org/10.1038/srep42918
  2. Eishi, Y., Suga, M., Ishige, I., Kobayashi, D., Yamada, T., Takemura, T., Takizawa, T., Koike, M., Kudoh, S., Costabel, U., et al. 2002. Quantitative analysis of mycobacterial and propionibacterial DNA in lymph nodes of Japanese and European patients with sarcoidosis. J. Clin. Microbiol. 40, 198-204. https://doi.org/10.1128/JCM.40.1.198-204.2002
  3. Gnerre, S., Maccallum, I., Przybylski, D., Ribeiro, F.J., Burton, J.N., Walker, B.J., Sharpe, T., Hall, G., Shea, T.P., Sykes, S., et al. 2011. High-quality draft assemblies of mammalian genomes from massively parallel sequence data. Proc. Natl. Acad. Sci. USA 108, 1513-1518. https://doi.org/10.1073/pnas.1017351108
  4. Gunthard, H., Hany, A., Turina, M., and Wust, J. 1994. Propionibacterium acnes as a cause of aggressive aortic valve endocarditis and importance of tissue grinding: case report and review. J. Clin. Microbiol. 32, 3043-3045.
  5. Handal, T., Olsen, I., Walker, C.B., and Caugant, D.A. 2004. Betalactamase production and antimicrobial susceptibility of subgingival bacteria from refractory periodontitis. Oral Microbiol. Immunol. 19, 303-308. https://doi.org/10.1111/j.1399-302x.2004.00159.x
  6. Lee, Y.J., Kim, M.K., Hwang, H.K., and Kook, J.K. 2005. Isolation and identification of bacteria from the root canal of the teeth diagnosed as the acute pulpitis and acute periapical abscess. J. Korean Acad. Conserv. Dent. 30, 409-422. https://doi.org/10.5395/JKACD.2005.30.5.409
  7. Leyden, J.J. 2001. The evolving role of Propionibacterium acnes in acne. Semin. Cutan. Med. Surg. 20, 139-143. https://doi.org/10.1053/sder.2001.28207
  8. Luo, R., Liu, B., Xie, Y., Li, Z., Huang, W., Yuan, J., He, G., Chen, Y., Pan, Q., Lifu, Y., et al. 2012. SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. Gigascience 1, 18. Erratum in: Gigascience 2015. 4, 30. https://doi.org/10.1186/2047-217X-1-18
  9. Mathisen, G.E., Meyer, R.D., George, W.L., Citron, D.M., and Finegold, S.M. 1984. Brain abscess and cerebritis. Rev. Infect. Dis. 6, S101-S106. https://doi.org/10.1093/clinids/6.Supplement_1.S101
  10. McDowell, A., Nagy, I., Magyari, M., Barnard, E., and Patrick, S. 2013. The opportunistic pathogen Propionibacterium acnes: insights into typing, human disease, clonal diversification and CAMP factor evolution. PLoS One 8, e70897. https://doi.org/10.1371/journal.pone.0070897
  11. Niazi, S.A., Al Kharusi, H.S., Patel, S., Bruce, K., Beighton, D., Foschi, F., and Mannocci, F. 2016. Isolation of Propionibacterium acnes among the microbiota of primary endodontic infections with and without intraoral communication. Clin. Oral Investig. 20, 2149-2160. https://doi.org/10.1007/s00784-016-1739-x
  12. Otto, T.D., Sanders, M., Berriman, M., and Newbold, C. 2010. Iterative correction of reference nucleotides (iCORN) using second generation sequencing technology. Bioinformatics 26, 1704-1707. https://doi.org/10.1093/bioinformatics/btq269
  13. Scholz, C.F. and Kilian, M. 2016. The natural history of cutaneous propionibacteria, and reclassification of selected species within the genus Propionibacterium to the proposed novel genera Acidipropionibacterium gen. nov., Cutibacterium gen. nov. and Pseudopropionibacterium gen. nov. Int. J. Syst. Evol. Microbiol. 66, 4422-4432. https://doi.org/10.1099/ijsem.0.001367