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Allele Frequency of the Bovine Y-chromosomal Microsatellite Locus in the Cattle Breeds

소 Y 염색체 특이 Microsatellite를 이용한 품종별 대립유전자 빈도 분석

  • Published : 2007.08.31

Abstract

The INRA124 is a bovine Y-chromosomal specific microsatellite locus that has been revealed a polymorphism. This locus has two alleles. The 132 bp allele is specific to cattle (humpless) of taurine origin and the 130 bp allele is specific to cattle (humped) of indicine origin. A total 822 males of 20 breeds or populations; North Eastern Asian breeds (Hanwoo, Korean Black cattle, Chik-so, CBK, Japanese Black cattle, Japanese Brown cattle, Yanbian cattle), Chinese yellow cattle (Luxi cattle, Nanyang cattle), European origin (Angus, Hereford, Charolais, Simmental, Brown swiss, Holstein, Limousin), African origin (Kavirondo zebu, White Fulani, crossbreed of N'Dama and Boran), Indian origin (Sahiwal) were characterized the distribution of alleles using INRA124 locus. Any individuals of European, Japanese origins and Hanwoo were not detected 130 bp allele, Bos indicus specific allele. Bos indicus breeds of Indian and African origins were not detected 132 bp allele, Bos taurus specific allele. CBK population that the crossbreed of Hanwoo, Brahman and Charolais showed the frequency of 0.19 in indicine specific allele. The breeds of Chinese mainland, Luxi and Nanyang cattle were detected 0.46 and 0.29 frequencies in indicine specific allele, respectively. These results suggest that Korean cattle, Hanwoo, had not been originated from a crossbred between Bos primigenius in Europe and Bos indicus in India.

Keywords

Bos taurus;Bos indicus;Y chromosomal microsatellite;Allele frequency

References

  1. Abe, T., Oishi, T., Suzuki, S., Amano, T., Kondo, K., Nozawa, K., Namikawa, T., Kumazaki, K., Koga, O., Hayashida, S. and Otsuka, J. 1968. Studies on the native farm animals in Asia. I. On blood groups and serum protein polymorphism of East Asian cattle. Jpn. J. Zootech. Sci. 39:523-535
  2. Baker, C.M.A. and Manwell, C. 1980. Chemical classification of cattle. I. Breed groups. Anim. Blood Grps Biochem. Genet. 11:127-150
  3. Bradley, D. G., MacHugh, D. E., Loftus, R. T., Sow, R. S. and Hoste, C. H. 1994. Zebu-taurine variation in Y chromosome DNA: a sensitive assay for genetic introgression in West African trypanotolerant cattle populations. Anim. Genet. 25: 7-12
  4. Bradley, D. G., MacHugh, D. E., Cunningham, P. and Loftus R. T. 1996. Mitochondrial diversity and the origins of African and European cattle. Proc. Natl. Acad. Sci. USA. 93:5131-5135
  5. Edwards, C. J., Gaillard, C., Bradley, D. G. and MacHugh, D. E. 2000. Y-specific microsatellite polymorphisrns in a range of bovid species. Anim. Genet. 31:127-130 https://doi.org/10.1046/j.1365-2052.2000.00602.x
  6. Giovambattista, G., Ripoli, M. V., De Luca, J. C., Mirol, P. M., Liron, J. P. and Dulout, F. N. 2000. Male-mediated introgression of Bas indicus genes into Argentine and Bolivian Creole cattle breeds. Anim. Genet. 31:302-305 https://doi.org/10.1046/j.1365-2052.2000.00658.x
  7. Hanotte, O., Okomo, M., Verjee, Y, Rege, E. and Teale, A. 1997. A polymorphic Y chromosome microsatellite locus in cattle. Anim. Genet. 28:308 https://doi.org/10.1111/j.1365-2052.1997.tb00011.x
  8. Hanotte, O., Tawah, C. L., Bradley, D. G., Okomo, M., Verjee, Y, Ochieng, J. and Rege, J. E. O. 2000. Geographic distribution and frequency of a taurine Bas taurus and an indicine Bas indicus Y specific allele amongst sub-Saharan African cattle breeds. Molecular Ecology 9:387396
  9. Kikkawa, Y., Amano, T. and Suzuki, H. 1995. Analysis of Genetic Diversity of Domestic Cattle in East and Southeast Asia in Terms of Variations in Restriction Sites and Sequences of Mitochondrial DNA. Biochem. Genet. 33:51-60 https://doi.org/10.1007/BF00554558
  10. Kikkawa, Y., Takada, T., Sutopo, Nomura, K., Namikawa, T., Yonekawa, H. and Amano, T. 2003. Phlyogenies using mtDNA and SRY provide evidence for male-mediated introgression in Asian domestic cattle. Anim. Genet. 34:96-101 https://doi.org/10.1046/j.1365-2052.2003.00956.x
  11. Loftus, R. T., MacHugh, D. E., Bradley, D. G., Sharp, P. M. and Cunningham, P. 1994. Evidence for two independent domestications of cattle. Proc. Natl. Acad. Sci. USA. 91:2757-2761
  12. Namikawa, T. 1980. Genetical Aspects of Domestication and Phylogeny in the Cattle. Jpn. J. Zootech. Sci. 51:235-246
  13. Phillips, R. W. 1961. World Distribution of The Major Types of Cattle. J. Hered. 52:207-213 https://doi.org/10.1093/oxfordjournals.jhered.a107071
  14. Sambrook, J., Fritsch, E. F. and Maniatis, T. 1989. 2nd Edition. Cold Spring Harbor Laboratory Press
  15. Vaiman, D., Mercier, D., Moazami-Goudarzi, K., Aggen, A., Ciampolini, R., Lepingle, A., Velmala, R., Kaukinen, J., Varvio, S. L., Martin, P., Leveziel, H. and Guerin, G. 1994. A set of 99 cattle micorsatellites: characterization synteny mapping, and polymorphism. Mammalian Genome 5:288-297 https://doi.org/10.1007/BF00389543
  16. Yoon, D., Lee, H. K., Oh, S. J., Hong, K. c., Jeon, G. J., Kong, H. S. and Lee, J. H. 2005. Genetic Relationships of Cattle Breeds Assessed by PCR-RFLP of the Bovine Mitochondrial DNA D-loop Region. Asian-Aust. J. Anim. Sci. 18(10): 1368-1374 https://doi.org/10.5713/ajas.2005.1368
  17. Yoon, D., Kwon, Y. S., Lee, K. Y., Jung, W. Y., Sasazaki, S., Mannen, H., Jeon, J. T. and Lee, J. H. 2007. Discrimination of Korean cattle (Hanwoo) using DNA markers derived from SNPs in bovine mitochondrial and SRY genes. Asian-Aust. J. Anim. Sci. accepted https://doi.org/10.5713/ajas.2008.70209
  18. 육종륭, 김환경, 박항균, 윤희섭, 설동섭, 정창국. 1985. 한우. 향문사
  19. 윤두학, 박응우, 이승환, 이학교, 오성종, 정일정, 홍기창. 2005. Microsatellite loci 분석에 의한 한우와 타 품종간의 유전적 유연관계. 한국동물자원과학회지 47(3): 341-354 https://doi.org/10.5187/JAST.2005.47.3.341
  20. 한성욱. 1996. 가축의 품종. 선진문화사
  21. MacHugh, D. E., Shriver, M. D., Loftus, R. T., Cunningham, P. and Bradley, D. G. 1997. Microsatellite DNA variation and the evolution, domestication and phylogeography of taurine and zebu cattle (Bas taurus and Bas indicus). Genetics 146:1071-1086
  22. Mannen, H., Kohno, M.. Nagata, Y, Tsuji, S., Bradley, D. G., Yeo, J. S., Nyarnsamba, D., Zagdsuren, Y, Yokohama, M., Nomura, K. and Amano, T. 2004. Independent mitochondrial origin and historical genetic differentiation in North Eastern Asian cattle. Molecular Phylogenetics and Evolution 32:539-544 https://doi.org/10.1016/j.ympev.2004.01.010

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